Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0674 ATGGGGTGTGTTTTTGGGCGAGAGGTATCTGAGAATCCCGTCCAGAAAGAAGAGGAGGAGGAGAGACAGAAGGCGGAGGAGGAAATTAGGGTTTCTGTCAAACCGGAGGTTTCTCAGGTTCAGGCTAATAATGCTCGCAATGGTGGAAGTAGGAAGGAGGTTGAAGATGATAGAGGTTCGAGGCAGAGAAGTGAGAGGCGGCGAAGGCCGAATCCGAGATCGAGTAATCCGCCGAAACATGTGCATGGCGAGCAAGTCGCCGCTGGATGGCCTTCTTGGCTTTCCGCCGTCGCCGGTGAGGCTATCAACGGATGGATTCCACGCCGTGCTGACTCTTTCGAGAAGCTTGATAAAATTGGGCAAGGGACATATAGTAATGTGTACAAAGCAAGGGACACATTGACAGGGAAGATTGTGGCTCTAAAGAAGGTTCGTTTTGACAATTTGGAGCCTGAGAGTGTGAGATTTATGGCCCGAGAAATTCTCATCCTGCGACGTCTGGATCATCCCAATGTTGTAAAACTAGAAGGTTTAGTGACATCCCGGATGTCTTGTAGTTTATATCTTGTATTTGAATACATGGAGCACGATTTGGCTGGACTTGCTGCGAGCCCCGGGATCAAGTTTACAGAACCACAGGTTAAATGCTACATGCACCAATTGTTATCAGGGCTCGAACACTGTCATAATCGTCATGTGCTGCATCGAGATATAAAGGGATCGAATCTTCTGATTGGTAACGATGGGATCCTTAAGATAGCTGATTTTGGATTGGCTTCTGTCTTTGATCCCAACCACAAGCAGCCAATGACAAGTAGGGTGGTTACTCTATGGTATCGACCTCCTGAACTTCTTCTTGGAGCTACTGATTATGGCGTTGGTGTAGACCTTTGGAGTGCTGGCTGCATTTTAGCTGAGCTGTTAGCCGGAAAGCCTATCATGCCCGGTCGCACAGAGGTTGAGCAGCTGCATAAGATATTTAAGTTATGTGGCTCTCCTACAGACGAATACTGGAAAAAGTCAAGGTTGCCTCATGCAACCATATTCAAGCCTCAACATTCATACAAGAGATGCATAGCAGAGACATTTAAAGATTTCCCACCATCGTCTCTGCCACTAATTGAGACACTTCTTGCAATCGACCCAGCTGAACGCCTGACCGCCACCGCTGCATTACATAGTGAATTTTTCACTACCAAACCATATGCTTGTGAACCTTCCAGCCTCCCTAAGTATCCTCCAAGCAAGGAAATGGATGCAAAACTCCGGGATGAAGAAGCAAGAAGGCTAAGAGCTGCTGGCAGAAGCAATGTAGATGGGGTGAAAAAATCACGGGCACGTGATAGAGCTGTTCGTGCAATTCCTGCACCAGAAGCCAATGCTGAGCTTCAAGCCAATCTCGATAGGCGACGTCTCATAACACACGCAAATGCAAAGAGCAAGAGTGAAAAGTTTCCTCCTCCACATCAAGATGGAGCACTTGGCTACCCGCTCGGATCTTCGCATCATATTGATCCAATCTACGATCCTCCTGACGTTCCATTTAGCACAATGAATTTCTCGTATCCAAAAGCAAACATTCACACATGGTCTGGTCCTTTGATGGATCCAGCTGCTGTTGGTGCTCCAAGAAGGAAAAAACACACAGCAGGCGACGGGCATTCATCAAAATCATCTAAAGACTTACGAAAAGATAAAAATTCAGTTCGGATCTAA 1716 46.85 MGCVFGREVSENPVQKEEEEERQKAEEEIRVSVKPEVSQVQANNARNGGSRKEVEDDRGSRQRSERRRRPNPRSSNPPKHVHGEQVAAGWPSWLSAVAGEAINGWIPRRADSFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVRFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASPGIKFTEPQVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLIGNDGILKIADFGLASVFDPNHKQPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPTDEYWKKSRLPHATIFKPQHSYKRCIAETFKDFPPSSLPLIETLLAIDPAERLTATAALHSEFFTTKPYACEPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNVDGVKKSRARDRAVRAIPAPEANAELQANLDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSHHIDPIYDPPDVPFSTMNFSYPKANIHTWSGPLMDPAAVGAPRRKKHTAGDGHSSKSSKDLRKDKNSVRI 571
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5892244 5896074 - CaPI482276_05g006740.1 Cam05g0674 126078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0674 571 MobiDBLite consensus disorder prediction 49 72 - -
Cam05g0674 571 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0674 571 MobiDBLite consensus disorder prediction 532 571 - -
Cam05g0674 571 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524(InterPro)
Cam05g0674 571 SMART serkin_6 113 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0674 571 MobiDBLite consensus disorder prediction 541 571 - -
Cam05g0674 571 MobiDBLite consensus disorder prediction 11 33 - -
Cam05g0674 571 Pfam Protein kinase domain 113 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0674 571 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Cam05g0674 571 PANTHER CELL DIVISION PROTEIN KINASE 112 397 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cam05g0674 571 ProSiteProfiles Protein kinase domain profile. 113 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0674 571 SUPERFAMILY Protein kinase-like (PK-like) 106 402 IPR011009 -
Cam05g0674 571 FunFam probable serine/threonine-protein kinase At1g54610 196 437 - -
Cam05g0674 571 MobiDBLite consensus disorder prediction 1 85 - -
Cam05g0674 571 FunFam probable serine/threonine-protein kinase At1g54610 100 195 - -
Cam05g0674 571 Gene3D Transferase(Phosphotransferase) domain 1 196 436 - -
Cam05g0674 571 CDD STKc_CDK9_like 113 397 - -
Cam05g0674 571 MobiDBLite consensus disorder prediction 477 498 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0395 Cam-Chr3:5064311 Cam05g0674 Cam-Chr5:5892244 3.40E-203 dispersed
Cam03g1660 Cam-Chr3:31704886 Cam05g0674 Cam-Chr5:5892244 2.30E-234 dispersed
Cam05g0674 Cam-Chr5:5892244 Cam05g1097 Cam-Chr5:10044173 3.00E-183 dispersed
Cam05g0674 Cam-Chr5:5892244 Cam02g1691 Cam-Chr2:29917626 7.10E-225 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85169 PF00069 Pkinase 2.80E-68 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0674 K08819 - csv:101217952 1076.23