Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam05g0685 | ATGGGTGGGTGTTTTCCTTGTTTTGGATCCTCCGATGAAGATGGTAATGGTGTGAAAGAAGCTACTAAGAAGGATTCAGCCAAGGATGGCTCCACCGCTCAGTCTCACCATGTTAGAAGAGTGAGCTCAGATAAATCGAAGTCACGGAGTGTATCTGATGCTAAGAAGGAGCCAACTGTTCAAAAGGATGGAACAACAGCACATATTGCTGCTCAAACATTTACATTCCGGGAGCTTGCTACAGCCACGAAGAACTTTAGATCAGAATGCTTGCTCGGAGAAGGGGGGTTTGGAAGGGTTTACAAAGGTCGCTTGGAGAGCACAGGACAGGTAGTGGCTGTGAAGCAGCTTGACCGTAATGGTCTTCAAGGAAATCGGGAATTTTTGGTGGAGGTTCTAATGCTTAGCCTGTTACATCACCCTAATCTTGTTAACTTGATAGGCTATTGTGCTGACGGGGATCAACGTCTTCTTGTTTATGAGTTCATGCCATTGGGTTCATTGGAAGATCATTTGCATGACCTTCCACCAGATAAGGAGCCCTTGGATTGGAATACGAGAATGAAGATTGCAGCTGGTGCTGCAAAAGGATTGGAATATTTGCATGACAAAGCAAACCCGCCTGTTATATATCGAGACTTGAAGTCGTCTAATATTCTTCTTGACGAGGGCTACCACCCCAAGCTGTCAGATTTTGGTCTTGCAAAACTGGGTCCAGTTGGTGACAAGACTCATGTCTCTACGAGAGTGATGGGAACATACGGTTACTGTGCTCCTGAGTATGCTATGACTGGCCAACTCACTCTCAAATCGGATGTATATAGTTTTGGAGTTGTCTTTTTGGAACTTATCACGGGTCGCAAGGCAATCGATAATACTAGAGGTCCAGGGGAGCATAATCTTGTGGCATGGGCTCGGCCACTTTTTAAAGATCGCCGGAAGTTCCCTAAGATGGCTGATCCACTACTGCAGGGTCGATATCCCATGCGGGGACTTTATCAGGCATTGGCAGTTGCAGCAATGTGCTTACAGGAACAGGCTGCAACGAGACCTCTAATTGGGGATGTTGTTACTGCTTTGACGTATTTAGCTTCCCAAACTTATGATCCTAATGCAGCTGCTTCTCAAAGCAATCGAATGGGTGGATCTACCCCACGAGCCCGAGATGAGCGGAGAGGTTTTCCAGATGGACTGGATAGCCCTGATGAGCGTGGACGAGGACGTGGTTCCCCATCGAACTACAGAAACTCACCTGATTACCGAAAGAAAGACCTCCATAGGGAAATGAGTTGTGGAGGTACAGAGCTGAGCAAAATCGACACTGGAGGCGGATCTGGTCGAAAATGGGGATTGGATGAGCTAGAGCGACAAGAATCTCTGCGAGACAGTCCTGTATATACTGGGAGAGCAAGGGAAACACCAAGGAACCGCGACCTAAACAGAGAACGTGCAGTTGCAGAAGCAAAAGAAATGAAGTTGCCAGTGCCTACTAGACTACAGGTAAAAATTGCAGGAAGAAGAGGAAGGAAAGATTCAGATTACAAAACTACAGCATTTATCTTTCCTCGATTCAAGTCGGTGCCGTCGCCGGTAGTTGAACGTGTCGATCATCGGCAGAACCGCCAAATTGCCGGGCTGCTTTTCTCCTTTTCCAAATTGTTGACAGTGGCGATTTTTGCTTGCCTGATCGCTTTTTCCGTCGGAAGGGAGTTCAGATTGAACCACAAGCACAGCGGTGATGATATTTCCTTTAACCATACTCTTGCCGAAATCTTGGTGGAGTATGCTTCTGCGGCATACATATCTGATTTAACGGAACTGTTTACTTGGACATGCACAAGATGCGATGACCTGACTCAGGGGTTTGAAGTTATAGAACTGGTTGTTGATGTCCAGCACTGTCTACAGGCATATGTTGGAGTAGCAAAGAGTCTAAATGCTGTCATTATTGCTTTTAGAGGAACTCAAGAAAACAGTGTACAGAACTGGATTGAAGACCTATACTGGAAGCAGCTTGACCTGATGTACCCTGGCATGCCAGATGCAATGGTGCACCATGGGTTTTATTATGCTTATCACAATACAACAATACGCCCTGCAATATTAAGTGCTGTTGATAGAGCCAGGAAGTTCTATGGTAACCTTGACATCATGGTGACTGGACATTCAATGGGTGGGGCAATGGCAGCATTTTGTGGCCTTGATCTTGCAGTTAACTACAATTCCCAGAATGTCCAGGTTATGACATTTGGACAACCTCGTATTGGCAATGCAGTATTTGCATCTTACTATAGCAATATAGTGCCAAATTCGTTTCGGGTTACGAATGGAAATGATGTCGTCCCCCATTTGCCTCCATTTTATGCTTATTTTCCTAAAAAGACATATCACCATTTTCCTAGAGAGGTTTGGCTTTATAACGTTGGATTCGGAAGTTTTGTTTATCAAGTTGAAAAGGTTTGTGATGATTCTGGTGAAGACCCATCTTGTAGCAGGTCTGTCTCAGGGAAAAGTATTTCAGATCATTTGGTGTACTATGGTGTTGAGTTAAGTAGTCCAGCATGGAGATCATGTAGATTTGTAATGGATCCTCCTCTGGCGGCATACGGAGCAACAGATCTGAACGGAAACCGAGTTTTCTCTAGGGATCCTGGAATTCCTCTTATCAGACTGAACAAACAATCGGGAACAGTCAAAGTTTTCAAAGATTTAGGGGCTTTTTAG | 2724 | 45.12 | MGGCFPCFGSSDEDGNGVKEATKKDSAKDGSTAQSHHVRRVSSDKSKSRSVSDAKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRSECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAAASQSNRMGGSTPRARDERRGFPDGLDSPDERGRGRGSPSNYRNSPDYRKKDLHREMSCGGTELSKIDTGGGSGRKWGLDELERQESLRDSPVYTGRARETPRNRDLNRERAVAEAKEMKLPVPTRLQVKIAGRRGRKDSDYKTTAFIFPRFKSVPSPVVERVDHRQNRQIAGLLFSFSKLLTVAIFACLIAFSVGREFRLNHKHSGDDISFNHTLAEILVEYASAAYISDLTELFTWTCTRCDDLTQGFEVIELVVDVQHCLQAYVGVAKSLNAVIIAFRGTQENSVQNWIEDLYWKQLDLMYPGMPDAMVHHGFYYAYHNTTIRPAILSAVDRARKFYGNLDIMVTGHSMGGAMAAFCGLDLAVNYNSQNVQVMTFGQPRIGNAVFASYYSNIVPNSFRVTNGNDVVPHLPPFYAYFPKKTYHHFPREVWLYNVGFGSFVYQVEKVCDDSGEDPSCSRSVSGKSISDHLVYYGVELSSPAWRSCRFVMDPPLAAYGATDLNGNRVFSRDPGIPLIRLNKQSGTVKVFKDLGAF | 907 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5961838 | 5973354 | - | CaPI482276_05g006850.1 | Cam05g0685 | 126089 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam05g0685 | 907 | MobiDBLite | consensus disorder prediction | 417 | 433 | - | - | |
Cam05g0685 | 907 | SUPERFAMILY | Protein kinase-like (PK-like) | 68 | 360 | IPR011009 | - | |
Cam05g0685 | 907 | ProSitePatterns | Protein kinases ATP-binding region signature. | 92 | 115 | IPR017441 | GO:0005524(InterPro) | |
Cam05g0685 | 907 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 209 | 221 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam05g0685 | 907 | ProSiteProfiles | Protein kinase domain profile. | 86 | 363 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam05g0685 | 907 | PANTHER | OS07G0668900 PROTEIN | 35 | 379 | - | - | |
Cam05g0685 | 907 | Pfam | Protein kinase domain | 90 | 297 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam05g0685 | 907 | FunFam | Serine/threonine-protein kinase PBS1 | 163 | 378 | - | - | |
Cam05g0685 | 907 | SMART | serkin_6 | 86 | 363 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam05g0685 | 907 | MobiDBLite | consensus disorder prediction | 1 | 64 | - | - | |
Cam05g0685 | 907 | MobiDBLite | consensus disorder prediction | 372 | 456 | - | - | |
Cam05g0685 | 907 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 162 | - | - | |
Cam05g0685 | 907 | MobiDBLite | consensus disorder prediction | 16 | 62 | - | - | |
Cam05g0685 | 907 | Gene3D | Transferase(Phosphotransferase) domain 1 | 163 | 381 | - | - | |
Cam05g0685 | 907 | CDD | Lipase_3 | 585 | 805 | - | - | |
Cam05g0685 | 907 | MobiDBLite | consensus disorder prediction | 384 | 409 | - | - | |
Cam05g0685 | 907 | FunFam | Serine/threonine-protein kinase PBS1 | 59 | 162 | - | - | |
Cam05g0685 | 907 | Pfam | Lipase (class 3) | 649 | 787 | IPR002921 | GO:0006629(InterPro) | |
Cam05g0685 | 907 | CDD | STKc_IRAK | 92 | 361 | - | - | |
Cam05g0685 | 907 | Gene3D | alpha/beta hydrolase | 585 | 853 | IPR029058 | - | |
Cam05g0685 | 907 | SUPERFAMILY | alpha/beta-Hydrolases | 585 | 849 | IPR029058 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g2391 | Cam-Chr1:35861841 | Cam05g0685 | Cam-Chr5:5961838 | 1.40E-42 | dispersed | |
Cam02g1431 | Cam-Chr2:27090637 | Cam05g0685 | Cam-Chr5:5961838 | 1.90E-160 | dispersed | |
Cam02g2142 | Cam-Chr2:34187682 | Cam05g0685 | Cam-Chr5:5961838 | 1.80E-131 | dispersed | |
Cam05g0685 | Cam-Chr5:5961838 | Cam10g2032 | Cam-Chr10:34163794 | 7.00E-150 | dispersed | |
Cam07g1141 | Cam-Chr7:25845899 | Cam05g0685 | Cam-Chr5:5961838 | 1.50E-07 | dispersed | |
Cam03g1137 | Cam-Chr3:22139614 | Cam05g0685 | Cam-Chr5:5961838 | 3.80E-122 | transposed | |
Cam06g0040 | Cam-Chr6:2224802 | Cam05g0685 | Cam-Chr5:5961838 | 5.50E-175 | transposed | |
Cam06g0542 | Cam-Chr6:7484225 | Cam05g0685 | Cam-Chr5:5961838 | 1.60E-121 | transposed | |
Cam09g1057 | Cam-Chr9:10932702 | Cam05g0685 | Cam-Chr5:5961838 | 6.60E-130 | transposed | |
Cam10g0512 | Cam-Chr10:7600385 | Cam05g0685 | Cam-Chr5:5961838 | 1.20E-138 | transposed | |
Cam03g1696 | Cam-Chr3:32095071 | Cam05g0685 | Cam-Chr5:5961838 | 2.10E-80 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85170 | PF00069 | Pkinase | 2.70E-45 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam05g0685 | - | - | - | 0.0 |