Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0685 ATGGGTGGGTGTTTTCCTTGTTTTGGATCCTCCGATGAAGATGGTAATGGTGTGAAAGAAGCTACTAAGAAGGATTCAGCCAAGGATGGCTCCACCGCTCAGTCTCACCATGTTAGAAGAGTGAGCTCAGATAAATCGAAGTCACGGAGTGTATCTGATGCTAAGAAGGAGCCAACTGTTCAAAAGGATGGAACAACAGCACATATTGCTGCTCAAACATTTACATTCCGGGAGCTTGCTACAGCCACGAAGAACTTTAGATCAGAATGCTTGCTCGGAGAAGGGGGGTTTGGAAGGGTTTACAAAGGTCGCTTGGAGAGCACAGGACAGGTAGTGGCTGTGAAGCAGCTTGACCGTAATGGTCTTCAAGGAAATCGGGAATTTTTGGTGGAGGTTCTAATGCTTAGCCTGTTACATCACCCTAATCTTGTTAACTTGATAGGCTATTGTGCTGACGGGGATCAACGTCTTCTTGTTTATGAGTTCATGCCATTGGGTTCATTGGAAGATCATTTGCATGACCTTCCACCAGATAAGGAGCCCTTGGATTGGAATACGAGAATGAAGATTGCAGCTGGTGCTGCAAAAGGATTGGAATATTTGCATGACAAAGCAAACCCGCCTGTTATATATCGAGACTTGAAGTCGTCTAATATTCTTCTTGACGAGGGCTACCACCCCAAGCTGTCAGATTTTGGTCTTGCAAAACTGGGTCCAGTTGGTGACAAGACTCATGTCTCTACGAGAGTGATGGGAACATACGGTTACTGTGCTCCTGAGTATGCTATGACTGGCCAACTCACTCTCAAATCGGATGTATATAGTTTTGGAGTTGTCTTTTTGGAACTTATCACGGGTCGCAAGGCAATCGATAATACTAGAGGTCCAGGGGAGCATAATCTTGTGGCATGGGCTCGGCCACTTTTTAAAGATCGCCGGAAGTTCCCTAAGATGGCTGATCCACTACTGCAGGGTCGATATCCCATGCGGGGACTTTATCAGGCATTGGCAGTTGCAGCAATGTGCTTACAGGAACAGGCTGCAACGAGACCTCTAATTGGGGATGTTGTTACTGCTTTGACGTATTTAGCTTCCCAAACTTATGATCCTAATGCAGCTGCTTCTCAAAGCAATCGAATGGGTGGATCTACCCCACGAGCCCGAGATGAGCGGAGAGGTTTTCCAGATGGACTGGATAGCCCTGATGAGCGTGGACGAGGACGTGGTTCCCCATCGAACTACAGAAACTCACCTGATTACCGAAAGAAAGACCTCCATAGGGAAATGAGTTGTGGAGGTACAGAGCTGAGCAAAATCGACACTGGAGGCGGATCTGGTCGAAAATGGGGATTGGATGAGCTAGAGCGACAAGAATCTCTGCGAGACAGTCCTGTATATACTGGGAGAGCAAGGGAAACACCAAGGAACCGCGACCTAAACAGAGAACGTGCAGTTGCAGAAGCAAAAGAAATGAAGTTGCCAGTGCCTACTAGACTACAGGTAAAAATTGCAGGAAGAAGAGGAAGGAAAGATTCAGATTACAAAACTACAGCATTTATCTTTCCTCGATTCAAGTCGGTGCCGTCGCCGGTAGTTGAACGTGTCGATCATCGGCAGAACCGCCAAATTGCCGGGCTGCTTTTCTCCTTTTCCAAATTGTTGACAGTGGCGATTTTTGCTTGCCTGATCGCTTTTTCCGTCGGAAGGGAGTTCAGATTGAACCACAAGCACAGCGGTGATGATATTTCCTTTAACCATACTCTTGCCGAAATCTTGGTGGAGTATGCTTCTGCGGCATACATATCTGATTTAACGGAACTGTTTACTTGGACATGCACAAGATGCGATGACCTGACTCAGGGGTTTGAAGTTATAGAACTGGTTGTTGATGTCCAGCACTGTCTACAGGCATATGTTGGAGTAGCAAAGAGTCTAAATGCTGTCATTATTGCTTTTAGAGGAACTCAAGAAAACAGTGTACAGAACTGGATTGAAGACCTATACTGGAAGCAGCTTGACCTGATGTACCCTGGCATGCCAGATGCAATGGTGCACCATGGGTTTTATTATGCTTATCACAATACAACAATACGCCCTGCAATATTAAGTGCTGTTGATAGAGCCAGGAAGTTCTATGGTAACCTTGACATCATGGTGACTGGACATTCAATGGGTGGGGCAATGGCAGCATTTTGTGGCCTTGATCTTGCAGTTAACTACAATTCCCAGAATGTCCAGGTTATGACATTTGGACAACCTCGTATTGGCAATGCAGTATTTGCATCTTACTATAGCAATATAGTGCCAAATTCGTTTCGGGTTACGAATGGAAATGATGTCGTCCCCCATTTGCCTCCATTTTATGCTTATTTTCCTAAAAAGACATATCACCATTTTCCTAGAGAGGTTTGGCTTTATAACGTTGGATTCGGAAGTTTTGTTTATCAAGTTGAAAAGGTTTGTGATGATTCTGGTGAAGACCCATCTTGTAGCAGGTCTGTCTCAGGGAAAAGTATTTCAGATCATTTGGTGTACTATGGTGTTGAGTTAAGTAGTCCAGCATGGAGATCATGTAGATTTGTAATGGATCCTCCTCTGGCGGCATACGGAGCAACAGATCTGAACGGAAACCGAGTTTTCTCTAGGGATCCTGGAATTCCTCTTATCAGACTGAACAAACAATCGGGAACAGTCAAAGTTTTCAAAGATTTAGGGGCTTTTTAG 2724 45.12 MGGCFPCFGSSDEDGNGVKEATKKDSAKDGSTAQSHHVRRVSSDKSKSRSVSDAKKEPTVQKDGTTAHIAAQTFTFRELATATKNFRSECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNTRGPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAAASQSNRMGGSTPRARDERRGFPDGLDSPDERGRGRGSPSNYRNSPDYRKKDLHREMSCGGTELSKIDTGGGSGRKWGLDELERQESLRDSPVYTGRARETPRNRDLNRERAVAEAKEMKLPVPTRLQVKIAGRRGRKDSDYKTTAFIFPRFKSVPSPVVERVDHRQNRQIAGLLFSFSKLLTVAIFACLIAFSVGREFRLNHKHSGDDISFNHTLAEILVEYASAAYISDLTELFTWTCTRCDDLTQGFEVIELVVDVQHCLQAYVGVAKSLNAVIIAFRGTQENSVQNWIEDLYWKQLDLMYPGMPDAMVHHGFYYAYHNTTIRPAILSAVDRARKFYGNLDIMVTGHSMGGAMAAFCGLDLAVNYNSQNVQVMTFGQPRIGNAVFASYYSNIVPNSFRVTNGNDVVPHLPPFYAYFPKKTYHHFPREVWLYNVGFGSFVYQVEKVCDDSGEDPSCSRSVSGKSISDHLVYYGVELSSPAWRSCRFVMDPPLAAYGATDLNGNRVFSRDPGIPLIRLNKQSGTVKVFKDLGAF 907
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5961838 5973354 - CaPI482276_05g006850.1 Cam05g0685 126089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0685 907 MobiDBLite consensus disorder prediction 417 433 - -
Cam05g0685 907 SUPERFAMILY Protein kinase-like (PK-like) 68 360 IPR011009 -
Cam05g0685 907 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524(InterPro)
Cam05g0685 907 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0685 907 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0685 907 PANTHER OS07G0668900 PROTEIN 35 379 - -
Cam05g0685 907 Pfam Protein kinase domain 90 297 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0685 907 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Cam05g0685 907 SMART serkin_6 86 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0685 907 MobiDBLite consensus disorder prediction 1 64 - -
Cam05g0685 907 MobiDBLite consensus disorder prediction 372 456 - -
Cam05g0685 907 Gene3D Phosphorylase Kinase; domain 1 56 162 - -
Cam05g0685 907 MobiDBLite consensus disorder prediction 16 62 - -
Cam05g0685 907 Gene3D Transferase(Phosphotransferase) domain 1 163 381 - -
Cam05g0685 907 CDD Lipase_3 585 805 - -
Cam05g0685 907 MobiDBLite consensus disorder prediction 384 409 - -
Cam05g0685 907 FunFam Serine/threonine-protein kinase PBS1 59 162 - -
Cam05g0685 907 Pfam Lipase (class 3) 649 787 IPR002921 GO:0006629(InterPro)
Cam05g0685 907 CDD STKc_IRAK 92 361 - -
Cam05g0685 907 Gene3D alpha/beta hydrolase 585 853 IPR029058 -
Cam05g0685 907 SUPERFAMILY alpha/beta-Hydrolases 585 849 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2391 Cam-Chr1:35861841 Cam05g0685 Cam-Chr5:5961838 1.40E-42 dispersed
Cam02g1431 Cam-Chr2:27090637 Cam05g0685 Cam-Chr5:5961838 1.90E-160 dispersed
Cam02g2142 Cam-Chr2:34187682 Cam05g0685 Cam-Chr5:5961838 1.80E-131 dispersed
Cam05g0685 Cam-Chr5:5961838 Cam10g2032 Cam-Chr10:34163794 7.00E-150 dispersed
Cam07g1141 Cam-Chr7:25845899 Cam05g0685 Cam-Chr5:5961838 1.50E-07 dispersed
Cam03g1137 Cam-Chr3:22139614 Cam05g0685 Cam-Chr5:5961838 3.80E-122 transposed
Cam06g0040 Cam-Chr6:2224802 Cam05g0685 Cam-Chr5:5961838 5.50E-175 transposed
Cam06g0542 Cam-Chr6:7484225 Cam05g0685 Cam-Chr5:5961838 1.60E-121 transposed
Cam09g1057 Cam-Chr9:10932702 Cam05g0685 Cam-Chr5:5961838 6.60E-130 transposed
Cam10g0512 Cam-Chr10:7600385 Cam05g0685 Cam-Chr5:5961838 1.20E-138 transposed
Cam03g1696 Cam-Chr3:32095071 Cam05g0685 Cam-Chr5:5961838 2.10E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85170 PF00069 Pkinase 2.70E-45 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0685 - - - 0.0