Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0781 ATGGCGTCGTCTCTGATTCTGAATCCTGTGGCGACTTCTGAGCGATCGCGTGATTCATCCAGAAAGAAGAAGAAGAAGAAAGCAACAAGGGAAGATGATCGTCAAGATCAAGATCACATCAAATGGAAATCACAAGCTCAGCATCAAGTTTACTCTTCGAAGCTGTTGCGCGCCTTGAATCAGGTCAGGATCAGTTCTCCTGAATCGACACCAAACGAAACGCCGCGCCGTGGCCGAGCGGTGCGGGAGGCTTCCGATACGGTTCTAGCCTTGACGGCAAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTAACGAACCGTCTCAAGCTCAAGTTTCGTAATAAGCACAATCGGCAGAAGGCGCGTGTGACCGGAAACAGCCGCACGAAGAAACCTAGTGTTAGCGTTTTGCGGTTTAGAGGGAAGGGATCACCAACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGGCTAGTTCCCGGCTGCCGGAAACAACCGCTGCCGGTGATTCTGGATGAAGTTACCGATTACATTCCGGCACTGGAGATGCAGATCCGTGTCATGAACGCCATAGTCAACTTGGTTTCAAGCTCTTCTTCATCTTCTTCTGGTATCGATTCTTCTACCTGA 627 50.4 MASSLILNPVATSERSRDSSRKKKKKKATREDDRQDQDHIKWKSQAQHQVYSSKLLRALNQVRISSPESTPNETPRRGRAVREASDTVLALTAKGRSRWSRAILTNRLKLKFRNKHNRQKARVTGNSRTKKPSVSVLRFRGKGSPTVQRKVRLLGRLVPGCRKQPLPVILDEVTDYIPALEMQIRVMNAIVNLVSSSSSSSSGIDSST 208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6807385 6808011 + CaPI482276_05g007810.1 Cam05g0781 126185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0781 208 MobiDBLite consensus disorder prediction 62 83 - -
Cam05g0781 208 MobiDBLite consensus disorder prediction 25 43 - -
Cam05g0781 208 CDD bHLH_AtIBH1_like 136 191 IPR044549 GO:0006355(InterPro)
Cam05g0781 208 MobiDBLite consensus disorder prediction 1 47 - -
Cam05g0781 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 39 194 IPR044660 GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1543 Cam-Chr2:28396354 Cam05g0781 Cam-Chr5:6807385 3.60E-27 dispersed
Cam05g0781 Cam-Chr5:6807385 Cam06g0442 Cam-Chr6:6558181 1.10E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0781 - - - 0.0