Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0783 ATGGAAAAGAAATTTGAAGACTCACTGATGGGGTTTGATAATTCTGCTGGATTTTACTCTCCGGCGGTGTTTTCCGATGAGTTTCCGGCGTCGAATTTTGATTCTTTTTCCAGTATTTTCGACATGCCATGTGATGACCATAAAGCTTCTGCTGCTGCTTCTTGTTCTTCTAATTCCTTTGACTTATTTAGTAGTGGAATTGAAATCCATGATTTTTACAATATTAATAATAATGATAATAATAATAATAATATTCCTTCTTCTTCTTCTTCTAATTTCTTCGATTTGCTTTCTACGGCGGCTCCGCCTCTTTCCTCACCGGCCTCCACCGTGCCGGAGTCCTCCGAGGTTCTTAATGCTCCACCCACTCCTAATTCTTCCTCTGTTTCTTCCTCCTCCAATGAAGCTACAGCTGCCATTCAAGAAGTTGACAAGATCAACAACAACACTGAGAAGCCCTCTTCTTCTAAAGTGTTGAAGCCAAAAAAGAAGAACCAGAAGAAGCAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGATATTGATCATCTCGACGATGGTTACCGATGGCGAAAGTACGGTCAAAAAGCTGTGAAGAACAGCCCTTATCCTAGAAGCTATTATCGTTGTACGACGGCAGGGTGCGATGTGAAGAAGAGAGTAGAACGATCGTCCGGCGACCATTCGATAGTTGTTACGACGTACGAAGGTCAACACACTCACCAAAGTCCGGTAATGCCGCGAGGAAGTATCAGAGTTTTACCAGAATCCACCAACAACGGTCTCATCGCGGATCACGACACCACCGCCACTGGACTTTTATTCCAACACAACACTCCCCAACCCTTCATGTGTAGCTCTCCGCCGCCGCCATTTCTAACAATCAACTCGTCGGTGGCGGCGGGAAGTTCCCGTCCTGCTCCTCCTCCTACTTCCTTCCCGCCACCACCGTCTCAAGCTTCTTTGGTCCGAGACCATGGACTTTTGCAGGACTTGGTGCCACTGCAAATGAGGAAGGAACTAAAAGATGAGCAAAATGGATGA 1047 45.46 MEKKFEDSLMGFDNSAGFYSPAVFSDEFPASNFDSFSSIFDMPCDDHKASAAASCSSNSFDLFSSGIEIHDFYNINNNDNNNNNIPSSSSSNFFDLLSTAAPPLSSPASTVPESSEVLNAPPTPNSSSVSSSSNEATAAIQEVDKINNNTEKPSSSKVLKPKKKNQKKQREPRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCDVKKRVERSSGDHSIVVTTYEGQHTHQSPVMPRGSIRVLPESTNNGLIADHDTTATGLLFQHNTPQPFMCSSPPPPFLTINSSVAAGSSRPAPPPTSFPPPPSQASLVRDHGLLQDLVPLQMRKELKDEQNG 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 6844335 6845876 + CaPI482276_05g007830.1 Cam05g0783 126187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0783 348 Pfam WRKY DNA -binding domain 186 243 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam05g0783 348 ProSiteProfiles WRKY domain profile. 180 245 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam05g0783 348 MobiDBLite consensus disorder prediction 105 155 - -
Cam05g0783 348 SUPERFAMILY WRKY DNA-binding domain 177 245 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam05g0783 348 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 103 256 IPR044810 GO:0003700(InterPro)
Cam05g0783 348 MobiDBLite consensus disorder prediction 295 323 - -
Cam05g0783 348 FunFam WRKY transcription factor 57 171 245 - -
Cam05g0783 348 SMART WRKY_cls 185 244 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam05g0783 348 Gene3D WRKY domain 170 246 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam05g0783 348 MobiDBLite consensus disorder prediction 105 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0783 Cam-Chr5:6844335 Cam10g1134 Cam-Chr10:24459105 2.20E-35 dispersed
Cam05g0783 Cam-Chr5:6844335 Cam06g0441 Cam-Chr6:6524678 7.10E-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51895 PF03106 WRKY 9.20E-26 CL0274 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0783 - - - 0.0