Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0797 ATGGCTCTCGACGCCGAAGCTGCACCAGCGGCGGAGTTGGCGCTTGCTGATACCGACATCAACTGGAACAGGTTGGACAAGACAAAGTTTCATATAATTGGGGCAATACTCTTTACGGCTCAGTCAGCCTTGTTACATCCAACAGCGGTTGTAAAAACTAGAATGCAAGTTGCTGGGTCTGGTCTATCTCACATGCGTGGACTGTCAGTTTTCTGGAATATATTGAAGTCTGATGGAATCTCTGGCTTGTATAGAGGTTTTGGTACTTCAGCGATTGGATCATTACCTGGTAGAGTATTGGCTTTAACATCACTAGAAGTATCAAAAGACATGATGTTGAAATATACTGGAAATTTGGAGATGTATGAAGCAACACGTGTTGGTCTTGCTAATGGAGTGGCAGGCATGATCTCGAATTTAGTTTCATGCATATACTATGTGCCATTGGACGTGACTTGCCAGAGGCTGATGGTTCAAGGGCTTCCTGGAACCACCTTCTGCAATGGCCCACTTGATGTTGTCAGAAAAGTGATGAAGGCTGAAGGATTTCGTGGTTTATATAGGGGTTTTGGATTAACGGCTGTAACTCAGTCCCCAGCATCTGCTCTCTGGTGGGGTGTTTATGGTGCTGCTCAGCATATTATCTGGAGGAGCTTAGGATATCAAGATAGCATGGAGAAGAAACCTTCTCACATGGAGATGGTGACGGTTCAGGCCACAGCAGGAATGGTGGCAGGTGCTTGTTCCTCTGTTATTACAACTCCCGTAGACACAGTAAAGACGCGACTTCAGGTCATCGATAACTATGGAATTGGAAGACCATCCGTGCTCAAGACTTCAAGAGCACTTCTCAAGGAAGATGGATGGTTGGGATTTTATAGAGGCTTTGGACCTCGGTTTTTGAATATGTCACTTTATGGAACCACGATGATAGTCACTTATGAACTGATCAAGAGACTTTCCTTAAAGGACATCGTGACATCTTGA 987 44.88 MALDAEAAPAAELALADTDINWNRLDKTKFHIIGAILFTAQSALLHPTAVVKTRMQVAGSGLSHMRGLSVFWNILKSDGISGLYRGFGTSAIGSLPGRVLALTSLEVSKDMMLKYTGNLEMYEATRVGLANGVAGMISNLVSCIYYVPLDVTCQRLMVQGLPGTTFCNGPLDVVRKVMKAEGFRGLYRGFGLTAVTQSPASALWWGVYGAAQHIIWRSLGYQDSMEKKPSHMEMVTVQATAGMVAGACSSVITTPVDTVKTRLQVIDNYGIGRPSVLKTSRALLKEDGWLGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSLKDIVTS 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 7049466 7052675 + CaPI482276_05g007970.1 Cam05g0797 126201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0797 328 Pfam Mitochondrial carrier protein 32 115 IPR018108 -
Cam05g0797 328 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
Cam05g0797 328 Pfam Mitochondrial carrier protein 237 322 IPR018108 -
Cam05g0797 328 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 324 - -
Cam05g0797 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 111 IPR018108 -
Cam05g0797 328 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Cam05g0797 328 Gene3D Mitochondrial carrier domain 119 324 IPR023395 -
Cam05g0797 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Cam05g0797 328 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0797 Cam-Chr5:7049466 Cam11g0513 Cam-Chr11:6559526 1.70E-82 dispersed
Cam05g0797 Cam-Chr5:7049466 Cam09g0080 Cam-Chr9:1669681 6.20E-64 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0797 K15121 - csv:101213375 617.846