Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0900 ATGGGTTTTCGGTTCCTTATGGCGAGAAGAGGAGGAGCAATTGGATCGTGGCTCTGCATCGTTGTGGTTTTAATTTCGACGCAAATTCACGTCTCAGCCAGATCGGATAAGGAAATCAGGGAGAGATTTTATGGAAACTTGATAAACTCGACGGCTCCGACTTCCGGTGACGGTAGCATTGCCCAAATGTTCGATAAGGTTCTTGAGAAGGAGTTCTCTGACAATGATCTGCCTGAAGGTTCTGGTGGAAGCAGCTTTAATAGCAGCGTTGCTGATCAGGAGGCAGAACTGGAGACGGTAGCTAAAATCACACATGAGAAGGGCAAGAAAAATGATAGTCAAAAGGCAAATGGGACAAGGGCATTCCAATTTCAGGATGTTTTTTCTCTGGAAAATGAAGAATCTGATGATGTTACAACGTTGATTGATAAAAAAGACAATGTATTTGTGATGTCAAACAAGAAGTCAAAGTATCCAGTACTTCAAGTAGATTTGAGATTGATCTCAGACTTGGTGGTGGTTATTGTTTCTGCCGCAATTGGAGGAATTATCTTTTCTTGTTTAGGGCAACCTGTTATTGTGGGCTATCTTCTTGCGGGGTCAATCATCGGACCAGGAGGTCTAAAATTCATCAGTGAAATGGTGCAGGTTGAGACAGTGGCACAATTTGGTGTTGTATTTCTTCTTTTTGCTTTAGGACTGGAGTTTTCTTTGACAAAGTTAAAAGTTGTGGGAGCTGTGGCTGTTTTTGGAGGTTTTCTACAGATCATCATATTTATGTTTTTGTGTGGTATCATTGCCATGTTAAGTGGAGCTAAACTGTCGGAGGGTGTATTTGTTGGTTCATTTCTATCAATGTCATCTACAGCAGTGGTGGTGAAGTTCTTGGTAGAACGGAATAGCAGTAATACTCTTCATGGTCAAGTTACTATTGGAACACTCATCTTACAGGATTGCGCTGTTGGTTTGTTGTTTGCCTTGCTCCCAGTTTTGGGTGGTCACAATGGTCTTATTTTAGGAATGATATCTATGGGGAAGTTGCTACTGGTGTTGTCAGTATATCTCACAGCTGCATCTATTTTGTCATGGTCATTTGTTCCCCGCTTTCTTAAGCTGATGATGCAGCTGTCGTCTCAAACAAATGAGTTGTATCAGCTTGCTGCTGTGGCATTTTGCTTGCTGTCTGCTTGGTGCAGTGATAAGCTGGGCCTCAGTCTTGAGTTGGGTTCCTTTGTAGCTGGAGTTATGATATCTACCACTGACTTCGGTCAGCATACTTTAGATCAGGTGGAGCCAATCCGCAATTTATTTGCAGCTTTGTTCCTTTCAAGTATTGGAATGCTCATTCATGTACATTTTCTGTGGAGCCATTTGGACATTTTGCTAGCATCTGTAATGCTGGTTGTGTTTGTCAAGACAGCAGTTGCTACCGTTGTTGCAAAGGCATTTGGATACAGTATTAGGACTTCTTTTCAGGTTGGGGTCATGCTTGCTCAAATTGGAGAATTTGCTTTTGTTCTCCTAAGCCGTGCTTCAAATCTTCATCTCATTGGGGGGAAAGTTTATTTACTTCTTCTTGGAACAACTGCACTTAGTCTGGTGACCACCCCTCTTCTGTTCAAATTGATACCTGCCGTGTTAAATTTAGGGGTTCTCATGCATTGGTTCCCCTCTGAAAACAACATACAAAATGAGTATAGTCGTCTCCCCTCCTCTGAAAGGTTTGTGAATATCAGAGCCGATTTCTCAGCCTTAATCGATTTTGGTTTTGGAGATTCTTTACTAGGTTGCTTTAGTTTCACCATTGATTCAGCTAGGCAACCTCATGGTCATCTGCCAAATCCATACCGCAAATTGAAAGCTCCACCACTCCCTCCACCTCCCCCCTCCGACGCCGGTCGTTCACATGCATCTCCGGTGAACCAGAAACCACCTGGAGCTCGAACTCAGATTCGTAATTCCCGATATCGAACCTGA 1977 42.94 MGFRFLMARRGGAIGSWLCIVVVLISTQIHVSARSDKEIRERFYGNLINSTAPTSGDGSIAQMFDKVLEKEFSDNDLPEGSGGSSFNSSVADQEAELETVAKITHEKGKKNDSQKANGTRAFQFQDVFSLENEESDDVTTLIDKKDNVFVMSNKKSKYPVLQVDLRLISDLVVVIVSAAIGGIIFSCLGQPVIVGYLLAGSIIGPGGLKFISEMVQVETVAQFGVVFLLFALGLEFSLTKLKVVGAVAVFGGFLQIIIFMFLCGIIAMLSGAKLSEGVFVGSFLSMSSTAVVVKFLVERNSSNTLHGQVTIGTLILQDCAVGLLFALLPVLGGHNGLILGMISMGKLLLVLSVYLTAASILSWSFVPRFLKLMMQLSSQTNELYQLAAVAFCLLSAWCSDKLGLSLELGSFVAGVMISTTDFGQHTLDQVEPIRNLFAALFLSSIGMLIHVHFLWSHLDILLASVMLVVFVKTAVATVVAKAFGYSIRTSFQVGVMLAQIGEFAFVLLSRASNLHLIGGKVYLLLLGTTALSLVTTPLLFKLIPAVLNLGVLMHWFPSENNIQNEYSRLPSSERFVNIRADFSALIDFGFGDSLLGCFSFTIDSARQPHGHLPNPYRKLKAPPLPPPPPSDAGRSHASPVNQKPPGARTQIRNSRYRT 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8074582 8085156 - CaPI482276_05g009000.1 Cam05g0900 126304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0900 658 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 18 567 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Cam05g0900 658 MobiDBLite consensus disorder prediction 618 633 - -
Cam05g0900 658 MobiDBLite consensus disorder prediction 611 658 - -
Cam05g0900 658 Pfam Sodium/hydrogen exchanger family 175 541 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cam05g0900 658 Gene3D - 165 548 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1585 Cam-Chr3:30840407 Cam05g0900 Cam-Chr5:8074582 4.30E-185 dispersed
Cam05g0900 Cam-Chr5:8074582 Cam08g2172 Cam-Chr8:27102097 6.40E-185 dispersed
Cam05g0897 Cam-Chr5:8065561 Cam05g0900 Cam-Chr5:8074582 5.00E-07 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0900 K26735 - csv:101207607 1014.6