Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0909 ATGGCTAATACTCCTCTCAAATGGCTCTGTTTATTGCTGTTTTTTCACTGTTTGATTCTTTCAACCTCTCAGCTTCTGAAAACTTATGTTGTTCAAATGGATAAGACTGCAATGCCGGACTCATTTACGGATCATCTTGACTGGTACTCCACAGTGCTAAGCAATGTGGTTGTTAATCTTGAAAGAGAAGGTAATGGGGGAGGAGGTGAAGAGAGGATTATTTACAGTTACCATAATGTTTTCCATGGAGTTGCAGCTCGATTGAGTGAAGAAGAGGCTGAGAAGCTCGAGGAAGAGGATGGGGTATTGGCCATTTTTCCTGAGACGAAGTATGAGCTTCATACTACCAGAAGCCCCAAATTTCTTGGGCTTGAACCAGCTGATAGCAATAGCGCCTGGTCTCAGCAAGTTGCAGACCATGATGTGATTGTTGGAGTTTTGGACACTGGGATTTGGCCGGAAAGTGAGAGCTTCAACGACGTCGGAATGTCGCCGGTGCCGGCGCATTGGAAAGGGGAATGTGAAACAGGACGAGGGTTCACGAAACAGAATTGTAATAGAAAGATCGTTGGGGCCAGAGTGTTCTACCATGGGTATCAAGCTGCAACTGGGAAATTTAACGAGCAGTTGGAGTACAAATCGCCAAGGGATCAAGATGGGCATGGAACTCATACGGCAGCCACTGTCGCTGGCTCTCCAGTGCCCGGCGCGAGCCTCCTTGGTTATGCATATGGAACGGCCAGAGGAATGGCGCCCGGAGCTAGAATTGCGGCTTACAAAGTTTGTTGGGTTGGTGGCTGTTTTAGCTCCGACATTTTGTCGGCTGTTGACAGAGCTGTGGCCGACGGAGTAAATGTTCTGTCCATCTCTTTAGGAGGTGGGGTCTCTTCTTACTATCGCGATAGTCTCTCCGTTGCAGCATTTGGAGCAATGGAGATGGGCGTGTTTGTCTCCTGCTCGGCCGGAAATGGAGGGCCAGACCCTGTCAGTCTCACAAATGTATCACCATGGATAACCACTGTCGGCGCTAGCACAATGGACAGAGATTTCCCGGCCATTGTCAAGCTCGGTAATGGCAGAACAGTCACCGGCGTTTCACTTTACAGAGGAAGAATCACAATTCCAGAAAACAAGCAATTCCCAGTTGTATACATGGGGAGTAACTCGAGCAGTCCTGATCCGAGCTCCCTGTGTTTAGAAGGAACTTTAGATCCTCATTTCGTGGCCGGAAAAATTGTGATATGCGATCGCGGAATTAGCCCTCGGGTTCAGAAGGGTGTGGTGGTGAAAAATGCAGGTGGGGTTGGGATGATTCTGTCTAACACGGCGGCGAATGGGGAAGAACTTGTTGCCGACTGCCATTTGGTACCGGCAGTTGCCGTCGGGGAAAGAGAAGGCAAAGCAATTAAGCAGTACGCATTAACGAATCGAAAAGCGACGGCGACGTTAGGGTTTTTAGGGACAAGATTGGGGGTAAAACCTTCGCCGGTGGTGGCAGCGTTTTCATCCAGAGGACCAAATTTCCTCACACTGGAGATCCTCAAGCCCGATCTGGTGGCTCCTGGCGTTAACATCCTCGCCGCTTGGACCGGAAAAACAGGGCCGTCGAGCTTGACGACGGATACAAGAAGGGTAAAATTCAACATTCTTTCAGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTAGCGGCTCTGATCAAATCGAAGCATCCCGATTGGAGCCCATCGGCGATCAAATCGGCACTAATGACCACCGCTTACGTCCACGACAACACCTATAAACCTCTCAAAGGCTCCTCCGCTGCATCACCGTCAAGTCCGTACGACCATGGCGCCGGCCACATAAACCCTAGAAAAGCCCTCGATCCTGGTTTGGTTTACGAAATTCAGCCTCAAGATTACTTCGACTTCCTCTGTACGCAGGATTTAACCCCTACACAACTTAAAGTGTTCTCTAAACATTCGAACAGATCATGCCATCGTCTTCTCCCCAACCCTGGAGACTTGAATTATCCGGCCATCTCCGCTGTTTTTCCTGAGAAAACCTCCGTCACTTCCCTGACCCTTCACAGAATCGTCACCAACGTCGGCCCTGCAACCTCCAGTTATCGTGCAGTGGTGACTCCGTTCAACGGCGCCACCGTGAAAGTTGAGCCGGAGAGTCTGAACTTCACAAGAAGGTATGAGAAGCTTTCTTACAGAATCACATTTCTGACGAAGAAGAGACAGAGTATCCCGGAATTTGGAGGGCTAATTTGGAAGGATGGAACTCATAAAGTGAGAAGCCCCATTGTGATCACTTGGTTGTCGTTTGTTTGA 2322 49.44 MANTPLKWLCLLLFFHCLILSTSQLLKTYVVQMDKTAMPDSFTDHLDWYSTVLSNVVVNLEREGNGGGGEERIIYSYHNVFHGVAARLSEEEAEKLEEEDGVLAIFPETKYELHTTRSPKFLGLEPADSNSAWSQQVADHDVIVGVLDTGIWPESESFNDVGMSPVPAHWKGECETGRGFTKQNCNRKIVGARVFYHGYQAATGKFNEQLEYKSPRDQDGHGTHTAATVAGSPVPGASLLGYAYGTARGMAPGARIAAYKVCWVGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMEMGVFVSCSAGNGGPDPVSLTNVSPWITTVGASTMDRDFPAIVKLGNGRTVTGVSLYRGRITIPENKQFPVVYMGSNSSSPDPSSLCLEGTLDPHFVAGKIVICDRGISPRVQKGVVVKNAGGVGMILSNTAANGEELVADCHLVPAVAVGEREGKAIKQYALTNRKATATLGFLGTRLGVKPSPVVAAFSSRGPNFLTLEILKPDLVAPGVNILAAWTGKTGPSSLTTDTRRVKFNILSGTSMSCPHVSGVAALIKSKHPDWSPSAIKSALMTTAYVHDNTYKPLKGSSAASPSSPYDHGAGHINPRKALDPGLVYEIQPQDYFDFLCTQDLTPTQLKVFSKHSNRSCHRLLPNPGDLNYPAISAVFPEKTSVTSLTLHRIVTNVGPATSSYRAVVTPFNGATVKVEPESLNFTRRYEKLSYRITFLTKKRQSIPEFGGLIWKDGTHKVRSPIVITWLSFV 773
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8165522 8167843 + CaPI482276_05g009090.1 Cam05g0909 126313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0909 773 CDD PA_subtilisin_like 354 483 - -
Cam05g0909 773 FunFam Subtilisin-like protease SBT1.5 141 363 - -
Cam05g0909 773 Pfam PA domain 381 469 IPR003137 -
Cam05g0909 773 FunFam subtilisin-like protease SBT1.5 347 490 - -
Cam05g0909 773 Pfam Fibronectin type-III domain 669 767 IPR041469 -
Cam05g0909 773 FunFam Subtilisin-like protease SBT1.9 17 114 - -
Cam05g0909 773 SUPERFAMILY Subtilisin-like 113 626 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam05g0909 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Cam05g0909 773 CDD Peptidases_S8_3 111 588 IPR034197 -
Cam05g0909 773 Gene3D - 347 491 - -
Cam05g0909 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 114 IPR037045 -
Cam05g0909 773 Pfam Subtilase family 140 593 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam05g0909 773 Gene3D - 639 770 - -
Cam05g0909 773 Pfam Peptidase inhibitor I9 28 114 IPR010259 -
Cam05g0909 773 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Cam05g0909 773 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Cam05g0909 773 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Cam05g0909 773 Gene3D Peptidase S8/S53 domain 141 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam05g0909 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 766 IPR045051 -
Cam05g0909 773 ProSiteProfiles Serine proteases, subtilase domain profile. 110 622 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0909 Cam-Chr5:8165522 Cam08g2112 Cam-Chr8:26545423 3.80E-229 dispersed
Cam01g0989 Cam-Chr1:13542628 Cam05g0909 Cam-Chr5:8165522 2.70E-82 transposed
Cam01g2607 Cam-Chr1:37587058 Cam05g0909 Cam-Chr5:8165522 5.50E-86 transposed
Cam01g0337 Cam-Chr1:3794803 Cam05g0909 Cam-Chr5:8165522 7.80E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0909 - - - 0.0