Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0910 ATGACGGAGGTTTACACTAGAATGCCAAGCGAAGATGATGAAGATTCGCCGGCCAAATGTCGAGAGCGCCGGCGCCGTAGAATAGAGATGAGACGGTTAGCAACAGTATCGTCGGGGAATCCCTCGCCCTCCACCACTCATCACCACCGGAAAGAGAATCAAACTGGTACCTCCGGTTTTGAGAAGAAGCGTGGTCGGAAGACGGACGGCGACGGTAATCCGGAGATTTCATCGTCTTCGTCATCGGGGGAGGAAGTGAAGACTGTAAGAGCTTCACCATCTGTACCTCAGCCGGTTTTCGGGATGATGTCGGTGTCCGGGAGGTCACGTGAGATGGAGGATGCAGTATCGGTGAGCACGTGCGTTTTAGGTTCAGAAAATTTCCGACGGCAACTCGTGCATTTCTTCGCCGTCTACGATGGACATGGAGGCCCTCACGTGGCAGCGCTTTGTAGGGAGAAGATGCACGTGTTCGTACAGGAGGAATTTTCGCGCGTGATGTGCACGCGCGAGGAAGGTGAGAGTGGCGGCGGTGGAAGCAGCGCGGGGGAGGAGGAGGAGGCGACTTGGAGAAGAGTGATGCAGCGGAGCTTTGAAAGAATGGACGAAATGGCACTCAGTACTTGTGCCTGTGGGAGCGTCGGAGGCCAGTGTGGGTGCCATCCGATGGAGGTGGCTCTCGGCGGCTCCACCGCTGTCGTCGCCGTGCTCACGCCGGATCACATAATCGTCGCCAACTGCGGCGATTCACGCGCTGTCCTTTGCCGAGGAGGAAGGGCCATTCCGCTTTCTAATGATCACAAGCCTGATAGAAATGATGAACTAGCAAGGATTGAAGCAGCTGGAGGACGGGTGATTTTCGTAAATGGAGCTCGGGTTGAAGGAATCCTTGCAATGTCCCGGGCAATAGGAGACAAGTATCTCAAGTCAGTTGTAATATCAGAGCCTGAAATTACATTTACTAAAAGAGAATCAGATGATGAATGTTTAATACTTGCAAGTGATGGTTTGTGGGATGTTCTTTCAAGTGAATTGGCTTGTGAGGTAGCTCGTGAATGTCTCCAAGAAGGAGCAGCGGCTGCTGCTACTACAATAGACCTCAATGCCACACCTCAAATTGAAGAAGAAGGGGCTGGAACTTCATATCCCTCTCGGAGTGCATTGGCTGCTGCATTGCTTACTCGTCTTGCTTTAGGGCGGAAAAGCACGGACAACATCAGTGTCATAGTTATTGATCTGAAGAGGAGCTGA 1251 52.44 MTEVYTRMPSEDDEDSPAKCRERRRRRIEMRRLATVSSGNPSPSTTHHHRKENQTGTSGFEKKRGRKTDGDGNPEISSSSSSGEEVKTVRASPSVPQPVFGMMSVSGRSREMEDAVSVSTCVLGSENFRRQLVHFFAVYDGHGGPHVAALCREKMHVFVQEEFSRVMCTREEGESGGGGSSAGEEEEATWRRVMQRSFERMDEMALSTCACGSVGGQCGCHPMEVALGGSTAVVAVLTPDHIIVANCGDSRAVLCRGGRAIPLSNDHKPDRNDELARIEAAGGRVIFVNGARVEGILAMSRAIGDKYLKSVVISEPEITFTKRESDDECLILASDGLWDVLSSELACEVARECLQEGAAAAATTIDLNATPQIEEEGAGTSYPSRSALAAALLTRLALGRKSTDNISVIVIDLKRS 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8178436 8184727 + CaPI482276_05g009100.1 Cam05g0910 126314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0910 416 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169(InterPro)
Cam05g0910 416 MobiDBLite consensus disorder prediction 1 95 - -
Cam05g0910 416 Pfam Protein phosphatase 2C 100 365 IPR001932 -
Cam05g0910 416 SUPERFAMILY PP2C-like 93 414 IPR036457 -
Cam05g0910 416 MobiDBLite consensus disorder prediction 45 71 - -
Cam05g0910 416 ProSiteProfiles PPM-type phosphatase domain profile. 99 413 IPR001932 -
Cam05g0910 416 PANTHER PROTEIN PHOSPHATASE 59 412 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cam05g0910 416 FunFam Protein phosphatase 2C 50 121 416 - -
Cam05g0910 416 CDD PP2Cc 99 413 IPR001932 -
Cam05g0910 416 MobiDBLite consensus disorder prediction 72 88 - -
Cam05g0910 416 Gene3D - 92 416 IPR036457 -
Cam05g0910 416 MobiDBLite consensus disorder prediction 1 23 - -
Cam05g0910 416 SMART PP2C_4 89 411 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0910 Cam-Chr5:8178436 Cam05g1049 Cam-Chr5:9518755 4.20E-65 dispersed
Cam05g0910 Cam-Chr5:8178436 Cam03g0118 Cam-Chr3:2108061 9.50E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0910 K14497 - csv:101206634 697.967