Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0924 ATGGCAAAAAATGTATCACTCTTATTTCTAATGATGATGGTTTGTCTGTCGGAAGGAGTTCTTGATAGCCATTATTACTCAAAAACATGTCCTAGTGCAGAAAAAATCATCCTCCAAACCGTCTACAATGCTTCCATTAATGACCCCAAAGTCCCTGCTCGTCTTCTCAGGCTCTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAGTGTTGATTGACTCGACGCCAGAGAATCAGGCAGAGAAAGATGCACCTCCAAACATCTCGCTAAGGTCGTTCTATGTAATCGACGAGGCCAAAGCCAAGCTTGAAAGTGCATGCCCACATACTGTTTCTTGTGCTGATATTGTCGCCATTGCTGCTAGAGATGTAGTAACTTTGTCTGGAGGCCCGTATTGGAGTGTACTCAAAGGAAGGAAAGATGGGAAGATTTCCAAAGCTTCAGAGACCATCAACTTGCCAGCTCCAACTTTCAATGTGTCTCAACTCATCCAGAGCTTTGCAAACAGAGGATTAGAAGTTAAGGACTTGGTTGCTCTATCTGGGGCTCACACACTTGGATTCTCACACTGTTCTTCCTTTCAATCTAGACTTCGCAACTTCAGCTCCATTCATGAAATTGATCCTGCTTTGGAATCTGGGTTCGCCCAAATTCTAAGAAACAAATGTCCAAAACCAAATTTGGACAAAAATGCTGGACAGTTCTTGGACCCAACTTCCTCAACCTTTGACAATGTGTATTACAAGAGACTGTTGGAAGGAAAGGGTGTGTTTGGTTCAGATCAAGCGTTGTTTGCTGATTCTAGAACTAGAGGGCTTGTTGGATTGTTTGCTCAAGATCAGAACTTGTTCTTTAAGGAGTTCGCAACTTCAATGGTGAATTTGGGTAATGTTGGGACTCTCCCAATAGTTGTTGAAGAAGACAGGTCGAAGTGTTGTGTAAACCACAACTGGGCTTCTCATCTCATGGACACCATATATCCAAGTGATAATCCTCGATATGCTCTGCACTTGAAAAGATATTTGTTGAAAATGCGATCAACATCATAA 1056 42.33 MAKNVSLLFLMMMVCLSEGVLDSHYYSKTCPSAEKIILQTVYNASINDPKVPARLLRLFFHDCFIRGCDASVLIDSTPENQAEKDAPPNISLRSFYVIDEAKAKLESACPHTVSCADIVAIAARDVVTLSGGPYWSVLKGRKDGKISKASETINLPAPTFNVSQLIQSFANRGLEVKDLVALSGAHTLGFSHCSSFQSRLRNFSSIHEIDPALESGFAQILRNKCPKPNLDKNAGQFLDPTSSTFDNVYYKRLLEGKGVFGSDQALFADSRTRGLVGLFAQDQNLFFKEFATSMVNLGNVGTLPIVVEEDRSKCCVNHNWASHLMDTIYPSDNPRYALHLKRYLLKMRSTS 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8375598 8377571 - CaPI482276_05g009240.1 Cam05g0924 126328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0924 351 FunFam Peroxidase 156 297 - -
Cam05g0924 351 CDD secretory_peroxidase 21 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam05g0924 351 PANTHER PEROXIDASE 25-RELATED 14 303 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cam05g0924 351 ProSiteProfiles Plant heme peroxidase family profile. 20 318 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Cam05g0924 351 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 SUPERFAMILY Heme-dependent peroxidases 21 316 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 Gene3D - 24 316 - -
Cam05g0924 351 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 Pfam Peroxidase 40 282 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g0924 351 Gene3D Peroxidase, domain 2 156 297 - -
Cam05g0924 351 FunFam Peroxidase 24 164 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2101 Cam-Chr1:34007564 Cam05g0924 Cam-Chr5:8375598 2.10E-93 dispersed
Cam04g0295 Cam-Chr4:10860401 Cam05g0924 Cam-Chr5:8375598 3.20E-73 dispersed
Cam05g0924 Cam-Chr5:8375598 Cam11g0735 Cam-Chr11:9140161 1.20E-68 dispersed
Cam05g0924 Cam-Chr5:8375598 Cam08g1884 Cam-Chr8:24838016 5.90E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0924 K00430 - csv:101210306 567.0