Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0975 ATGAGTCCGCCCGCCGTCGAACCTCCGTTACTTCTTCTTTTCCTGCTTGCTGCAGCGCTGCGGTGCCCTCTCGCCGGAGCGCGCCTTCTGGTGGAGATGACGGTGGTCCGAAACGCCTCTTCCATCGGAGCCTTTTGTTTGGACGGAAGCTTGCCGGCGTATCACCTGGACAGAGGATTCGGCGCCGGAGCGGGAAACTGGCTTTTACAGTTCGAGGGTGGTGGGTGGTGCAATGATGTAAAGTCTTGTTTGGAGAGAGCGAATAGTCGAAGAGGATCAACGCGTTTGATGACCAAATGGGAAGACTTCTCTGGCATTCTTAGCAACAATGCTTCTCTTAATCCAGATGTTTGGTTGACTTCAACAAATAATAAGTTGTTGATATGTCCGTATAATCCTGGATATCATTGGATGATAGTTGTCATCAATCTACGGAGTAATATAGTGTATTCAGTTGACTCCATGGGACTTGGTGTTCGTGAAGATGTGAAAACTATTGTCAATACGGGCATAAGAATGTTTTATGCTCGAACAAGTACACGATCCCGACCTATTATGTGGGTACCCGTTAAGTGTGCTAAACAACCGGGCAGCACGAAATGTGGGTACTGTGATGGAGCCTCATTTGCTGGAGATGCCTTGTTTGACAATGGGACATCGCTGCTTTATTTCAAAGGGCAAAAGATATGGGAATCCATCATTCTTGACCTTCTACCAAAAGGGTTGGGGACAGCAAGGAAGGCTCTGCTTTCTGGTTGCTCTGCTGGAGGTTTAGCAACTTTTCTTCATTGTGAAAATTTCACCAAGTATTTGCCAAGGAATGCTAGTGTCAAATGCTTGAGTGATGCTGGATTTTTTCTTGACTTAAGAGACATTGGTCTAAACCACACAATGAGGAACTTTTATAGGGATCTTGTGGCTCTTCAGGGGATGGAGCAAAATTTGAATGAAAACTGCACAGCCTCCTCTTACTTTCCAGAATTGTGCATATTCCCTCAGTATTCATTGAAGTACATAACAACACCATTTTTCATTCTGAATTCAGCATATGATGTTTACCAATTTCATCATGGGTTGGTGCCACCATCTGCTGATTTACATGGACATTGGAACCATTGCAAATTTAATCCAGCAGAGTGTAGTGAACTACAGATTCAGGCATTGCAAGGTCTAAGAATGAGTATGCTTTCTGCATTAAGATTATTCTATGAATATTCAAGCAGAGGAGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAGTCACAAGACACATGGTTTGCTGACGACTCCCCAACAATAGACAACAAGACTATAGCAGAAGCAGTTGGAGATTGGTATTTTAGCAGGAGAAACACAAAGGAAATTGATTGTGCATATCCATGTGACTCTACTTGCCATAATATTATACCATAA 1422 43.39 MSPPAVEPPLLLLFLLAAALRCPLAGARLLVEMTVVRNASSIGAFCLDGSLPAYHLDRGFGAGAGNWLLQFEGGGWCNDVKSCLERANSRRGSTRLMTKWEDFSGILSNNASLNPDVWLTSTNNKLLICPYNPGYHWMIVVINLRSNIVYSVDSMGLGVREDVKTIVNTGIRMFYARTSTRSRPIMWVPVKCAKQPGSTKCGYCDGASFAGDALFDNGTSLLYFKGQKIWESIILDLLPKGLGTARKALLSGCSAGGLATFLHCENFTKYLPRNASVKCLSDAGFFLDLRDIGLNHTMRNFYRDLVALQGMEQNLNENCTASSYFPELCIFPQYSLKYITTPFFILNSAYDVYQFHHGLVPPSADLHGHWNHCKFNPAECSELQIQALQGLRMSMLSALRLFYEYSSRGGMFINSCFAHCQSESQDTWFADDSPTIDNKTIAEAVGDWYFSRRNTKEIDCAYPCDSTCHNIIP 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 8766283 8781598 - CaPI482276_05g009750.1 Cam05g0975 126379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0975 473 Pfam Ulp1 protease family, C-terminal catalytic domain 122 202 IPR003653 GO:0006508(InterPro)|GO:0008234(InterPro)
Cam05g0975 473 Gene3D Adenoviral Proteinase; Chain A 82 204 - -
Cam05g0975 473 PANTHER NOTUM-RELATED 202 470 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
Cam05g0975 473 SUPERFAMILY Cysteine proteinases 123 203 IPR038765 -
Cam05g0975 473 Pfam Pectinacetylesterase 201 453 IPR004963 GO:0016787(InterPro)
Cam05g0975 473 Pfam Pectinacetylesterase 28 118 IPR004963 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0975 Cam-Chr5:8766283 Cam07g1437 Cam-Chr7:28950564 5.90E-92 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0975 K19882 - csv:101216160 552.362