Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1034 ATGGCCATCGCCGTGCTCGATGCCCTCGACAACGCTCGTACACAATGGTACCATGTTACGGCTATAGTCATAGCCGGGATGGGATTCTTTACGGACGCCTATGATCTTTTTTGCATCTCGACCGTGTCGAAGCTTCTTGGTCGACTTTATTACTTTGATCCAGATAGTAGTAAGCCTGGAAAACTTCCGAACCCCGTCAACAACGCCGTCGTTGGAGTTGCGCTAGTCGGAACCCTAATGGGGCAGCTTTTCTTTGGGTGGTTGGGTGATAAACTTGGAAGGAAGAAAGTTTATGGTGTTACCCTTATTCTTATGGCCTTTTGTGCCATTTGCTCAGGGCTTTCTTTTGGGTCAACATCAAAATCAGTGATAGGTACACTTTGTTTCTTTAGATTTTGGCTTGGATTTGGCATTGGTGGCGACTACCCACTTTCAGCCACCATCATGTCGGAATATGCCAACAAAAAGACTCGAGGAGCTTTCATTGCGGCTGTGTTTGCCATGCAGGGTGTGGGGCTAATATTTGCAGGGCTAGTATCAATGATCCTATCAAAAATCTTCCTGACCCTTCATGATGCTCCCATTTACAAACACGACCCTGTATTTTCCACACAACCTCAAGGAGATTTCCTATGGAGAATTGTGCTAATGCTTGGTGCTTTACCAGCCATTTTAACTTACTATTGGAGAATGAAAATGCCTGAAACAGGACGTTACACTGCCCTTATTGAAGGCAATGCCAAACAAGCTGCTGCAGATATGGGAAAAGTTTTAGAGATCACAATTCAAGCTGAGCAAGACAAACTTGCCAATTTCAAATCAGCCAATGAATATGGTTTGTTGTCTAAAGAATTCTTTCATCGCCATGGACTCCATTTGATTGGAACTACCACTACTTGGTTCTTGTTGGACATTGCATTTTATAGCAATAACCTTACTCAAAAAGACATATTCCCAGCTATGAATTTGACCAAACAGGCGGATGCAGTTAATGCATTGGAAGAAGTTTATGAAACTTCTAAAGCTATGTTCCTTGTTGCCTTACTTGGAACTTTCCCTGGATATTGGTTCACTGTTTTCCTCATTGAGAGGCTTGGAAGGTTCAAAATCCAATTGATTGGATTCTTCATGATGTCAGTTTTCATGGCCGTCCTCGGCATTCGTTACAATTACTTGAAGCACCATCCCGCCGAGTTCGCCGTGCTTTATGGCTTGACATTCTTCTTTGCCAACTTTGGTCCTAATAGCACCACCTTTGTCCTCCCTGCAGAGCTCTTCCCGACTAGGGTCCGATCGACATGTCATGCGCTAAGTGCTGCATCCGGGAAGGCCGGTGCAATCGTTGGAGCTTTCGGGGTGCAAAATTATACACTAGATGGAAACCCTAGTAAGATTCAAAAGGCTATGATTTTCTTGGCCTTCACTAACATGCTAGGGTTTGTGTTTACATTCTTGGTGACGGAGACTAAAGGGCGGTCGTTGGAGGAGATCTCCGGCGAGGACGGGCGCGCAGGTGATAATGAAAGTCAAATGCCAGTTAGATCAATGGGAAAGCCAGGAGGTCAAATGGAAGAATAA 1578 44.68 MAIAVLDALDNARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYFDPDSSKPGKLPNPVNNAVVGVALVGTLMGQLFFGWLGDKLGRKKVYGVTLILMAFCAICSGLSFGSTSKSVIGTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGVGLIFAGLVSMILSKIFLTLHDAPIYKHDPVFSTQPQGDFLWRIVLMLGALPAILTYYWRMKMPETGRYTALIEGNAKQAAADMGKVLEITIQAEQDKLANFKSANEYGLLSKEFFHRHGLHLIGTTTTWFLLDIAFYSNNLTQKDIFPAMNLTKQADAVNALEEVYETSKAMFLVALLGTFPGYWFTVFLIERLGRFKIQLIGFFMMSVFMAVLGIRYNYLKHHPAEFAVLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAIVGAFGVQNYTLDGNPSKIQKAMIFLAFTNMLGFVFTFLVTETKGRSLEEISGEDGRAGDNESQMPVRSMGKPGGQMEE 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 9330340 9332616 - CaPI482276_05g010340.1 Cam05g1034 126438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1034 525 SUPERFAMILY MFS general substrate transporter 9 498 IPR036259 -
Cam05g1034 525 Gene3D MFS general substrate transporter like domains 17 514 IPR036259 -
Cam05g1034 525 Pfam Sugar (and other) transporter 23 498 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cam05g1034 525 NCBIfam phosphate:H+ symporter 6 500 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cam05g1034 525 CDD MFS_PhT 22 490 - -
Cam05g1034 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857(InterPro)
Cam05g1034 525 FunFam Inorganic phosphate transporter 1-6 17 511 - -
Cam05g1034 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 6 496 - -
Cam05g1034 525 MobiDBLite consensus disorder prediction 496 525 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1034 Cam-Chr5:9330340 Cam07g0118 Cam-Chr7:2381909 5.80E-181 dispersed
Cam05g1034 Cam-Chr5:9330340 Cam06g0711 Cam-Chr6:9628168 3.60E-183 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1034 K08176 - csv:101210631 943.725