Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1111 ATGGTCTTTGTTTTGATCTTCTTCTCTCTCACTTGCTCTTTCTCACCTTCCTATGGATATGACTCATTGGACCCTTATGCTAACATTACCATCACATGGGATTTCTTGGTAGAGAATGGGGATACTTATGATGTGAGGGTTTCATTGTACAATTTCCAACTGTTTCGCCATGTGGAGTTGCCTGGTTGGAAACTTGGCTGGTCATGGAAAGGTGAGGAGGTTATATGGAGTATGTGGGGAGCAGAGGCTACTCAGCAAGGAAATTGCTCCAAATACATAGGCAGAGAGCTTCCTCATTGTTGTGAGAAGAAGCCTGTGATTGTTGATCTTATGCCTGGAGCTCCTTATAAGTTGCAGGTGGCTAATTGTTGTAAAGGAGGCGTGCTATCTTCCATGAGACAAGAGTCTGCCAACTATGGAGCTGCCTTCCAAATGAATGTTGGGAAGTCTTCTGGAAAGGATGTAGATAACAAAATGCCTGAAAATTTCACACTGGGGCTTCCTGGATATACTTGTAGTGAACCATTTCAAGTCCCTCCGACCAAATTCAGTAAGGATGGCGGTCGCCGGTGGACACAAGTTCTAGAAACATGGAATGTGACCTGTGTTTACTCCCAATTTCAATCATCACCAACACCAAGGTGCTGCGTTTCATTGTCATCTTTCTACAACAGCACCATTGTCCCTTGCCCTCAGTGCAGCTGTGGTTGCCAAGGGCTAGAGGGAACAAAATGTGTCAAGTCAGGTGAAACTCCTTCAGTGTTGCAACTTCCACATGCACATTACACTGCTGAAGTAGAACCATTGGTGAGGTGTTCACAGCACATGTGCCCAATAAGGGTGCATTGGCACGTGAAACAGAGTTATACACAGTATTGGAGGGTAAAGATAACAATCACAAATCTAAACTTTGCTAAGAATTACTCTGATTGGAACTTAGTAGTGATGCATCCCAATTTGCGGAATATTACTCAAGTTTTCAGCTTCAACTACAGCCCCCTCAATCAGTATGGTAACATCAATGACACAGGGATGTTTTGGGGGATTCACTTCTACAATGACTTGTTACTCACATCAGGAGAGAGAGGGAATGTCCAAACAGAAATTCTTCTCCAAAAAGATTCAGAAATTTTCACTTTCAGAGAAGGATGGGCATTCCCAAGAAGAATTTTGTTCAATGGGGATGAATGTGTAATGCCACCTCCAGACCAATATCCAAGGCTCCCAAATAAATCTCACAGGGCCATGGCAGCCTCATTCATAGTTTTCTTCTTCTTGTTTCTCTCTGTATCATTATAA 1299 43.11 MVFVLIFFSLTCSFSPSYGYDSLDPYANITITWDFLVENGDTYDVRVSLYNFQLFRHVELPGWKLGWSWKGEEVIWSMWGAEATQQGNCSKYIGRELPHCCEKKPVIVDLMPGAPYKLQVANCCKGGVLSSMRQESANYGAAFQMNVGKSSGKDVDNKMPENFTLGLPGYTCSEPFQVPPTKFSKDGGRRWTQVLETWNVTCVYSQFQSSPTPRCCVSLSSFYNSTIVPCPQCSCGCQGLEGTKCVKSGETPSVLQLPHAHYTAEVEPLVRCSQHMCPIRVHWHVKQSYTQYWRVKITITNLNFAKNYSDWNLVVMHPNLRNITQVFSFNYSPLNQYGNINDTGMFWGIHFYNDLLLTSGERGNVQTEILLQKDSEIFTFREGWAFPRRILFNGDECVMPPPDQYPRLPNKSHRAMAASFIVFFFLFLSVSL 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 10232661 10236104 + CaPI482276_05g011110.1 Cam05g1111 126515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1111 432 PIRSF COBRA 1 432 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cam05g1111 432 PANTHER PROTEIN COBRA 5 427 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cam05g1111 432 Pfam COBRA-like protein 43 205 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1111 Cam-Chr5:10232661 Cam06g1688 Cam-Chr6:28261538 1.30E-138 dispersed
Cam05g1111 Cam-Chr5:10232661 Cam06g1687 Cam-Chr6:28258485 2.40E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1111 - - - 0.0