Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam05g1126 | ATGGAGATGAATCTCCCCAACTACTGGCCGGCCGAGAAAAATGGCGAAGAGAAGAAGAAGGAAGATCATAAGCAAGGAAATGAAGATGACGACGACAACGATAGCGATAGCGACATGCCGTCGTCGTTGAGCCTTAGAGAGCTTTCTAAGGTTATACTTCCACCTTTGGGAGTTTCAAGCTTTACTGATGACAATAAAGTCCATTCCAATAGATGGATCATCTCCCCCATGAGCTCAAGATACAGGTGGTGGCAGTCGTTCATGGTGGTTTTGGTTGCTTACTCGGTGTGGGTTTACCCATTGGAAGTGGCGTTTATGGACGCAATTCCCAAGCGCCAATTATTAATTGCAGACAGTATTGTCGATCTTTTCTTCGCCATTGATATCTTCTTCACCTTCTTCGTTGCTTACATTGATCATCACACTCAGCTTCTCGTTCGTGATTCTAAGAAGATAGCTATCAGGTACTTGTCAACATGGTTCTTGATGGATTTAGCATCAACAATCCCATTTGAGACACTGGCCTATCTGTCCACAGGCAAATATGATCTTTGTCTCCCTTTTGCCCTCCTAGGATTGCTCAGATTTTGGCGATTGCGACGTGTCAAGCAATTTTTTACCAGGCTTGAGAAGGACATTAGATTCAGCTACTTTTGGGTTCGATGTGCTAGGCTCCTATCTGTCACTTTATTTTATGTCCATTGTGCTGGATGCCTCTACTACTTGTTGGCTGATCGATATCCACATGAAGGGAAGACCTGGATCGCAACCTTATTTCCAAATTTCAAAGAGATTAGCCTTGGAGTGAGATATACTTCAGCCATGTATTGGTCTATCACCACAATGACCACTGTTGGTTATGGTGATCTTCATGCTGTGAACACCGCGGAGATGATCTTTATCATTTTCTACATGCTCTTCAATCTCGGGCTAACTGCTTACTTGATCGGTAACATGACAAACTTAGTCGTTGAAGGAACTCGCCGCACAATGGAATTTAGAAACAGCATCGAAATGGCTTCAAATTTTGTTAACCGAAATCGCCTGCCTTCGAGGGTGAAGGAACACATATTGGCATACATGTGCTTGAGATTCAAGGCTGAGAGCCTAAACCAACAACAGCTGATTGAACAGCTTCCAAAGTCAATTTGCAAAAGCATCTGTCAGCAATTGTTTTTGCCGACCGTGGAGAAAGTCTACCTCTTCAAGGGCGTCTCAAAGGAAACACTTGTGGTGCTGGTAGCGAAGATGAAAGCTGAGTATATACCGCCTAAGGAGGACGTGATAATACAAAACGACACTCCTGATGAAGTTTATATCATTGTGTCTGGGGAAATTGAAATTATTGACTGTGAGATGGATGTGGAACGGATTGTTGGGACGTTACAGTGTGGCAGTATGTTTGGGGAAGTAGGAGCACTTTGTTGCAAAAACCAAAATTTTACATACAGAACCAGAACTCTTTCACAGCTCTTGAAGCTGAAAACAAGTGTACTACAAGAAGCTATGCATATCAAACAAGCAGACAGTATGATCATTGTCAAGAACTTCCTTCAGGAAAGGGAGCTCAGCCACAAAATCACCATAGAAGGTTCGCCTGAAAAAGAGGTGCCAACGTTGATTGAAGAAAAGGATCAAAGTTTCAATTGGAAACACTCCATTGAATTAGATTTTGCTAGAGTGAACATATACAAAGGCCATCCAGTAGCCAGAAAACAGGCTTCTTGTGATGATCCTGGAAAGCTGATCAGACTGCCACATTCAATGGAGGAGCTCAAAAAAATTGCAGGTGAAAAGTTTGGATTTGATGCAAGAAATGCTGTTTTGACAAATGAAGAAGGCTCTGAAATTGATTCTATTGATTCTGCTGCCACTGCTCCTACTGTCCACCATCCGCTGCCATATAGCTGCTGTCTGTCGACCACCACCGTCCTCCGCTGTATGCCGCCATTGCCCTTGCTGTCCACCATCCGCTGCCATATAGAGCTCTGGAGACTAGAGAGCTACACATTTCATATGCATGGTAGGGAATGCACAATTATGCTGCAGGACGGTTCAATTTAG | 2064 | 43.51 | MEMNLPNYWPAEKNGEEKKKEDHKQGNEDDDDNDSDSDMPSSLSLRELSKVILPPLGVSSFTDDNKVHSNRWIISPMSSRYRWWQSFMVVLVAYSVWVYPLEVAFMDAIPKRQLLIADSIVDLFFAIDIFFTFFVAYIDHHTQLLVRDSKKIAIRYLSTWFLMDLASTIPFETLAYLSTGKYDLCLPFALLGLLRFWRLRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFYVHCAGCLYYLLADRYPHEGKTWIATLFPNFKEISLGVRYTSAMYWSITTMTTVGYGDLHAVNTAEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEMASNFVNRNRLPSRVKEHILAYMCLRFKAESLNQQQLIEQLPKSICKSICQQLFLPTVEKVYLFKGVSKETLVVLVAKMKAEYIPPKEDVIIQNDTPDEVYIIVSGEIEIIDCEMDVERIVGTLQCGSMFGEVGALCCKNQNFTYRTRTLSQLLKLKTSVLQEAMHIKQADSMIIVKNFLQERELSHKITIEGSPEKEVPTLIEEKDQSFNWKHSIELDFARVNIYKGHPVARKQASCDDPGKLIRLPHSMEELKKIAGEKFGFDARNAVLTNEEGSEIDSIDSAATAPTVHHPLPYSCCLSTTTVLRCMPPLPLLSTIRCHIELWRLESYTFHMHGRECTIMLQDGSI | 687 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 10410741 | 10420309 | - | CaPI482276_05g011260.1 | Cam05g1126 | 126530 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam05g1126 | 687 | SMART | cnmp_10 | 401 | 518 | IPR000595 | - | |
| Cam05g1126 | 687 | Pfam | Ion transport protein | 81 | 330 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cam05g1126 | 687 | Pfam | Cyclic nucleotide-binding domain | 421 | 503 | IPR000595 | - | |
| Cam05g1126 | 687 | SUPERFAMILY | cAMP-binding domain-like | 328 | 518 | IPR018490 | - | |
| Cam05g1126 | 687 | MobiDBLite | consensus disorder prediction | 12 | 27 | - | - | |
| Cam05g1126 | 687 | ProSiteProfiles | KHA domain profile. | 560 | 649 | IPR021789 | - | |
| Cam05g1126 | 687 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Cam05g1126 | 687 | Gene3D | - | 83 | 324 | - | - | |
| Cam05g1126 | 687 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 401 | 520 | IPR000595 | - | |
| Cam05g1126 | 687 | FunFam | Potassium channel KAT2 | 389 | 524 | - | - | |
| Cam05g1126 | 687 | PRINTS | EAG/ELK/ERG potassium channel family signature | 271 | 288 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cam05g1126 | 687 | PRINTS | EAG/ELK/ERG potassium channel family signature | 118 | 128 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cam05g1126 | 687 | PRINTS | EAG/ELK/ERG potassium channel family signature | 297 | 308 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cam05g1126 | 687 | PRINTS | EAG/ELK/ERG potassium channel family signature | 315 | 324 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cam05g1126 | 687 | FunFam | Potassium channel KAT3 | 83 | 325 | - | - | |
| Cam05g1126 | 687 | Pfam | KHA, dimerisation domain of potassium ion channel | 560 | 621 | IPR021789 | - | |
| Cam05g1126 | 687 | CDD | CAP_ED | 401 | 504 | IPR000595 | - | |
| Cam05g1126 | 687 | SUPERFAMILY | Voltage-gated potassium channels | 76 | 324 | - | - | |
| Cam05g1126 | 687 | Gene3D | Jelly Rolls | 337 | 537 | IPR014710 | - | |
| Cam05g1126 | 687 | PANTHER | POTASSIUM CHANNEL AKT1 | 28 | 544 | IPR045319 | GO:0005249(InterPro)|GO:0006813(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam05g1126 | Cam-Chr5:10410741 | Cam06g1282 | Cam-Chr6:24205752 | 2.00E-128 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam05g1126 | K21867 | - | csv:101205212 | 1150.58 |