Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1188 ATGGCTTCCCTCTCTATTGGGATTCATTTGCCTCCATCCCATCATTGGAAGAGATTTTCACTTCAGTCCCAGTCTCCCATTTCACTCCCATTTCACACCAGCTATGGTTCTTCGTTGAGTAAAGTCAGAACTCCAAGGTTGCTTCGTAAGAACCTTCTTATGCGGGCTGAAGACGAGGATAAAAGCTCTTCACCAGCAACCTCTTCTTCATTTGAACAACAGCAAGCTCCACCCAACTTCACTAAACAACTGGAGGAACTCTCATCCAAGTCAGGAACATGTGATCCCCTATGCTCAGTTGACGAAATAAGTTCGCAGGAGTTCGAAGATAGTTACCAGCCAAAGACCGACTTAGTAAAGGCTTTTGCAATATTTGCAGCTGCTCTTACTGGAACAGTGGCAATTAATCACTCCTGGGTTGCTGCTAATCAGGATCTTGCTATGGTGTTGTTATTTAGTATAGGATATGCTGGAATCATTTTTGAAGAATCTCTTGCCTTCAACAAGAGTGGAGTGGGATTATTGATGGCGGTTGGCTTATGGGTTGTTCGAAGTATTGGGGCTCCATCCACTGAAATTGCTGCTTCAGAGCTAACACATGCCACAGCAGAAGTCAGTGAAATTGTATTTTTCTTACTTGGGGCAATGACCATTGTGGAGATTATCGACGCCCATCAAGGATTTAAGTTGGTTACAGACAGTATAACCACTCGAAAACCACGAACTCTCCTCTGGGTGATTGGGTTTGTAACCTTTTTTCTAAGTTCAATCCTCGACAACCTGACGACCACAATTATCATGGTTTCTCTATTGCGAAAACTAGTTCCTCCATCAGAATATCGCAAGCTACTTGGAGCTGTAATCGTTATAGCAGCAAATGCGGGTGGTGCGTGGACGCCTATTGGAGATGTAACCACCACCATGCTATGGATACATGGTCAGATATCAACACTGCCAACACTCAAAGGCTTGATTATACCTTCAGCTGTTTCGCTTGCAGTACCGCTGGCCCTGCTGTCCCTTACAAGTGAAGTTAATGAAAAGGGACAGGATTTTTCAAATGTTATGGCGTCGGAGCAGATGGCTCCTCGAGGGAAGCTTGTCTTCTCTGTAGGTGTTGGAGCTTTAGTTTTTGTTCCAGTGTTCAAGGCTCTCACAGGTTTGCCCCCCTACATGGGTATGCTGCTTGGTCTTGGAATTCTCTGGATTCTGACTGATGCTATTCACTATGGTGAATCGGAAAGGCAAAAGTTGAAAGTTCCTCAGGCTTTGTCTCGTATCGATACGCAGGGAGCTCTATTTTTCCTTGGTATCCTTTTGTCTGTCAGCAGCTTAGAGGCTGCGGGTGTGTTACGCGAGTTAGCAAACTACCTTGATGCTCATATTCCGAACGTTGAACTCATTGCGAGTGCAGTCGGTGTTATATCAGCAATTATAGACAATGTACCATTAGTTGCAGCAACAATGGGGATGTATGACGTCTCCTCTTTCGCTCAAGATTCCGAGTTCTGGCAGCTAATTGCATTTTGTGCTGGCACTGGTGGATCCATGCTTATAATTGGATCTGCAGCTGGAGTTGCATTCATGGGGATGGAGAAGGTGGACTTCTTTTGGTACTTAAGAAAGGTTAGCGGTTTCGCTTTTGCGGGATATGCTGCTGGAATTGCTGCCTATTTAGCCCTTCATAGCCTCAACATATCGCTACCTACAACTATTGCCGAGGTGCCTTCCATTTTGGGTTCATAA 1746 45.02 MASLSIGIHLPPSHHWKRFSLQSQSPISLPFHTSYGSSLSKVRTPRLLRKNLLMRAEDEDKSSSPATSSSFEQQQAPPNFTKQLEELSSKSGTCDPLCSVDEISSQEFEDSYQPKTDLVKAFAIFAAALTGTVAINHSWVAANQDLAMVLLFSIGYAGIIFEESLAFNKSGVGLLMAVGLWVVRSIGAPSTEIAASELTHATAEVSEIVFFLLGAMTIVEIIDAHQGFKLVTDSITTRKPRTLLWVIGFVTFFLSSILDNLTTTIIMVSLLRKLVPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTLKGLIIPSAVSLAVPLALLSLTSEVNEKGQDFSNVMASEQMAPRGKLVFSVGVGALVFVPVFKALTGLPPYMGMLLGLGILWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGVLRELANYLDAHIPNVELIASAVGVISAIIDNVPLVAATMGMYDVSSFAQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHSLNISLPTTIAEVPSILGS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 11168189 11173652 + CaPI482276_05g011880.1 Cam05g1188 126592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1188 581 MobiDBLite consensus disorder prediction 56 77 - -
Cam05g1188 581 NCBIfam sodium:proton antiporter NhaD 173 403 - -
Cam05g1188 581 Pfam Citrate transporter 157 489 IPR004680 GO:0016020(InterPro)|GO:0055085(InterPro)
Cam05g1188 581 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 53 578 IPR045016 GO:0006814(InterPro)|GO:0015297(InterPro)
Cam05g1188 581 MobiDBLite consensus disorder prediction 63 77 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1188 - - - 0.0