Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1395 ATGGAGCAAGGATCTGGGATTTCCACTCCTTCCAATCCTTCTCAGCTCTCGCGGGCATGTCTTACAAGGAATATAATACTTGCATACCAAAGTTTTGGAGTAGTGTATGGAGATTTGAGCACTTCACCCCTCTACGTTTACTCAAGTACATTTGCGGGGAAGTTGCAGAAACATCGAACTGAGGAAGTAGTATTTGGTGCATTCTCCTTGATCTTCTGGACTTTTACTCTGATACCATTACTAAAGTATGTTTTCATTGTATTGAGCGCAGATGACAATGGCGAAGGAGGAACCTTTGCTCTTTACTCCCTGCTCTGCCGACATGCTAAGTTGAGTTTACTTCCCAACCAACAAGCAGCTGATGAGGAGCTCTCAGCATACAGATATGGTCCATCTTCTCATGCAGTAGCCCCTTGTCAACTAAAAAGGTTTTTGGAAAGGCATAAAACACTTAGGACGATCTTACTTCTTGTCGTATTATTTGGTGCTTGCATGGTCATTGGTGATGGAGTGCTAACTCCTGCAATTTCAGTTCTATCCTCAGTTTCAGGTTTACAAGTTACTGAAGCAAAATTGACCAACGGGACACTCCTTTTGATTGCTTGTGCCATATTGGTTGGTCTGTTTGCTCTGCAGCATTGTGGCACCCATAAGGTTGCATTTATGTTTGCTCCAATAGTTATCATCTGGTTGTTGTCAATTTTCTCCATTGGTCTGTACAACATAATACATTGGAACCCAAGTATTATTCGTGCAATTTCCCCTCATTATGTTATCAAGTTCTTACAAATCACTGGTAAAGATGGTTGGCTTTCTCTCGGAGGGGTTCTTCTGGCCATAACTGGTACTGAGGCGATGTTTGCAGATCTTGGTCATTTCACGGCTTTGTCAATAAGGATTGCATTTGCGTTTGTTATCTACCCTTGTTTGGTAGTACAATACATGGGTCAAGCTGCCTTTCTGTCTAAGAACCTTGATTTGTTTCCAAACAGTTTTTATGACTCGATACCTGATCCTGTATTTTGGCCTGTTTTTGTTATTGCCACCCTTGCAGCTATTGTGGGGAGCCAGGCTGTCATTACTGCTACTTTCTCTATTGTCAAACAATGCCATGCCCTTGGTTGCTTTCCAAGAGTAAAAGTTGTCCACACCTCTAAACACATATATGGGCAGATCTACATCCCAGAAATAAACTGGATATTAATGATCCTCACTCTTTCCATTACAATAGGGTTTCAAGATACGACACTGATCGGAAATGCTTATGGACTCGCCTGCATGACAGTTATGTTCACAACAACATTTCTTATGGCACTTGTCATAGTATTCGTTTGGCAAAAAAGTATCCTGCTAGCCGCACCTTTTCTCATCTTCTTCTGGTCTGTCGAGGGTGCCTACTTATCAGCAGCAATCATAAAAGTGCCTCAAGGAGGGTGGGTCCCGCTTGTGCTATCAGCCTTTTTTATGATAGTTATGTTTGTCTGGCACTATGGCACTCGCAAGAAGTACAACTTTGATCTACACAATAAAGTTTCACTGAAGTGGTTGCTTGGACTAGGCCCTAGCCTTGGTATAGTTCGTGTCCCTGGGATTGGCCTCATATACTCGGAATTGGCGACAGGAGTACCCGCAATATTTTCTCACTTTGTGACAAATCTCCCTGCATTTCACAAGGTTTTAGTGTTTGTTTGTGTAAAGTCTGTTCCAGTTCCATATGTCTCTCCCGAAGAACGTTTTCTGATTGGGAGAGTCTGTCCTAGACCATATCGCATGTATCGGTGCATAGTGAGATATGGCTACAAGGACATTCAGAAGGATGATGGGGACTTTGAGAACCAACTGATACTCAACATTGCGGAATTCATTCAAATGGAGGCAGAGGAACCACAATTCTCAAGCTCTGAAAGTTCTTCAGTTGATGGGAGGATGGCAGTAATAAGCACTCGGAGTATACAATCAAGCTTGAGTTTAATAGTGTCAGGGCACGAAGAAATCGGTACCAGCAACTCCATCTATAGCAGCAAATCTGCCACACTCCAAAGTTTACGATCTGTGTATGAGGATGAGAATCCACAACTAAGAAGGCGCCAAGTGAGGTTTCAGCTATCTCCCAGCCCTTCAATGGACCCTAGAGTTAGGGAAGAATTAATAGACTTGATCCAAGCCAAAGAAGCGGGTGTAGCATATATAATGGGGCACTCATATGTGAAGGCCAGAAGATCTTCGTCATATTTGAAGAAGCTTGTGATAGATATCGGATACTCGTTCCTCCGAAAGAACTGCAGAGGCCCGTCTGTTGCGCTCAATATCCCTCACATCAGTCTAATCGAAAGGGTGGTGGAGAACAAATGA 2352 43.03 MEQGSGISTPSNPSQLSRACLTRNIILAYQSFGVVYGDLSTSPLYVYSSTFAGKLQKHRTEEVVFGAFSLIFWTFTLIPLLKYVFIVLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYRYGPSSHAVAPCQLKRFLERHKTLRTILLLVVLFGACMVIGDGVLTPAISVLSSVSGLQVTEAKLTNGTLLLIACAILVGLFALQHCGTHKVAFMFAPIVIIWLLSIFSIGLYNIIHWNPSIIRAISPHYVIKFLQITGKDGWLSLGGVLLAITGTEAMFADLGHFTALSIRIAFAFVIYPCLVVQYMGQAAFLSKNLDLFPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLSITIGFQDTTLIGNAYGLACMTVMFTTTFLMALVIVFVWQKSILLAAPFLIFFWSVEGAYLSAAIIKVPQGGWVPLVLSAFFMIVMFVWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQKDDGDFENQLILNIAEFIQMEAEEPQFSSSESSSVDGRMAVISTRSIQSSLSLIVSGHEEIGTSNSIYSSKSATLQSLRSVYEDENPQLRRRQVRFQLSPSPSMDPRVREELIDLIQAKEAGVAYIMGHSYVKARRSSSYLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIERVVENK 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 15789163 15797919 - CaPI482276_05g013950.1 Cam05g1395 126799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1395 783 NCBIfam potassium uptake protein 27 777 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cam05g1395 783 Pfam K+ potassium transporter C-terminal domain 529 777 IPR053952 -
Cam05g1395 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 22 777 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cam05g1395 783 Pfam K+ potassium transporter integral membrane domain 27 516 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0058 Cam-Chr3:1525942 Cam05g1395 Cam-Chr5:15789163 8.50E-234 dispersed
Cam03g0429 Cam-Chr3:5302927 Cam05g1395 Cam-Chr5:15789163 1.40E-202 dispersed
Cam03g0431 Cam-Chr3:5312643 Cam05g1395 Cam-Chr5:15789163 2.10E-207 dispersed
Cam05g1395 Cam-Chr5:15789163 Cam09g1936 Cam-Chr9:34047979 4.80E-248 dispersed
Cam05g1395 Cam-Chr5:15789163 Cam10g1237 Cam-Chr10:25788990 2.00E-249 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1395 K03549 - csv:101208973 1492.63