Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1456 ATGTTGTTCATACAGTCTAAAGGTGATCCCTCCTCATCTAGTGAGGGGCCCAATGGTGTTCGGTGGAAAAAAGACTATGAATCTGAGTATCATGTGTTGTTTCATTGCAAAAATGCTTCAAAAGTGTGGTTGAGTCTCTTACTTGAGGTTGCAAATATGTTGAGCGAGATGAATTCTTGTGGACATGTGTTGGTGAAGACGGTGCTTTGTCTAAATAGTGATCAATTCCTTCAATTCGATGTTGGGTGTTGGGCAATTTGGGAGGATCAGAACAAGGAAGGATCCCTTGATGCTGAAGCCAGCGAAACATCATGCTTAAAGACAAATTATATGTTTGAACAAATTAACGAAGTGGCCCTCGCTGTCTTCGGAGTTTTTCCAGTTTCCTCCTCGAATCGGTTGCGTTCAATTCCGCTCGACGCTCGTGGAGGTTCTATTACATCGACGATGGGAAGGCGATCCGTATGGGTTGCACTTCTTGTCTTTTCTCTTCTTCTTTCTCTGCGACCCCACACAGTTTCTTCCACTCTTCCTCTTCAATCATTGATTCAGGGTTCTAAAGATTCTGCCAGTGAAAGTACTCCAGAGCAGGATTGGAACAATGCTCATGAGGTACATTGCTCAAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATGCCCTTTGTGGAAAAAAAGAAATACAAGATTTCTACTAAGTGTAGACTTCACCCTGATAATGATATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTACGAAGAAAAGTATCTCGATCAGCACTTTGACAATAGACACTATAATTTGCTCAATGTGAGTCGAAGCAGGTGCTTGGCAGATCTTTGTGGTGCATTGCACTGTGACCATGTGATAGATACAGTATCACCGAAAAGTAAATGCAATCCTGCTGCTGCTGCAAGAAATAAACATATGTGTGAGGGTCTTGCGGACAGCTGTTTTCCGGTTGATGAGGGTGCTTCGGCCAGCCATCTTCACGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGCTAGGACGAGTGCGTTCTACATTGTGATTTCAGTTTTGACAGTCCTTTTTGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGTATATTTCCTTTGCCTACCCTCATTTGTATGATCATAAGATCTTCGACTTTGATTTGACAGTCGCACTCGTCTTACAGGGGAATGAGAACTCGACCACAGGTCCTTGTTTCACAGCCCAAGAGGTCATTAGATAG 1353 42.87 MLFIQSKGDPSSSSEGPNGVRWKKDYESEYHVLFHCKNASKVWLSLLLEVANMLSEMNSCGHVLVKTVLCLNSDQFLQFDVGCWAIWEDQNKEGSLDAEASETSCLKTNYMFEQINEVALAVFGVFPVSSSNRLRSIPLDARGGSITSTMGRRSVWVALLVFSLLLSLRPHTVSSTLPLQSLIQGSKDSASESTPEQDWNNAHEVHCSRERSRAAWKIIEEYLMPFVEKKKYKISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNVSRSRCLADLCGALHCDHVIDTVSPKSKCNPAAAARNKHMCEGLADSCFPVDEGASASHLHEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKRYISFAYPHLYDHKIFDFDLTVALVLQGNENSTTGPCFTAQEVIR 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17825131 17831383 + CaPI482276_05g014560.1 Cam05g1456 126860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1456 450 MobiDBLite consensus disorder prediction 1 18 - -
Cam05g1456 450 MobiDBLite consensus disorder prediction 1 20 - -
Cam05g1456 450 PANTHER ZINC FINGER PROTEIN-RELATED 159 406 - -
Cam05g1456 450 ProSitePatterns Zinc finger C2H2 type domain signature. 264 285 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1456 Cam-Chr5:17825131 Cam06g1912 Cam-Chr6:30051723 4.90E-88 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1456 - - - 0.0