Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1460 ATGCCAAGCGTGGCTGTGAAGCTCTACAGCGTCTTCTTCAAGTTTCTCTTGAAGCATCGTTTGCAGAATCTGATCCAAGCTCCACTTGACGAATCGAGCCCTTTTGGAGTCACATCTCGACCCGAAGAAACGGTTGCTTCCGCTAATCCTTTGTTCACCGACGGCGTCGCTACCAAGGATATCCACATCGATCCGTTTACATCTCTGAGCATTCGGATCTTCCTCCCTGAATCTGCTCTTACTCCGCCTGAAACCGACTCCAAACCCTCTTCCAAATCGTCCAAGCCTAAACCTAAACGGTCCAATCAAGATGCTCAAACCGATCTTGTTAATCACAATGTGAATAATGTACAACAGTACCCTTCTCGTCGGAATAGCTATGGCCCTTCGGGAAATACCAGGGAAGAACTGCGGGGTAGTAGATTAGGGGGTTACAGTAATGAAATGGAGGGATTGAATTTGATTCAAGGCCCTGCCCCTGGTGGCGTTTACAGAGGCTATGCGCCGGTGACGGAGAATAGTCGAAGGTTGCCGGTGATGTTGCAATTTCATGGCGGGGGGTGGGTTAGTGGGAGCAATGATTCGGCGGCCAATGATTTCTTTTGCCGGAGGATCGCAAAATTGTGCGATGTTATTGTCGTTGCCGTCGGGTATCGGCTTGCACCAGAGAACCGATTTCCGGCTGCGTTTGAGGATGGATTGAAGGTGTTGAATTGGTTGGGTAAGCAGGCCAATTTGGCCGAGTGCAGCAAGTCTATGGGGAATACCAAAGGCAATGGCAATGAGTTTAAGAAATCGGATAATCATAGGCATATTGTTGACACATTTGGTGCGTCAATGGTAGAGCCTTGGTTGGCAGCCCATGGAGACCCAACAAGATGTGTTCTTCTTGGGGTTAGCTGTGGAGCAAATGTTGCAGATTATGTGGCTCGAAAGGCTGTGGAGGCCGGTAAGCTCTTGGACCCTGTCAAGGTTGTTGCCCAGGTTCTCCTGTACCCATTTTTCGTTGGGAGTGTCCCCACTCATTCAGAGTTGAAGCTGGCCAATTCGTATTTTTACGACAAAGCTATGTGCCTTCTTGCTTGGAAGCTATTCCTACCCGAGGAAGAGTTTAGTCTTGACCATCCAGCTGCAAACCCCCTTGTTTCTGGTAGAGAAGGTCCACCTCTTAAGCTCATGCCACCAACGCTGACAGTTGTGGCTGAACTCGACTGGATGAGAGACCGAGCCATAGCTTACTCTGAAGAACTTCGAAAGGTAAATGTCGATGCACCTGTTCTTGACTACAAGGATGCAGTGCATGAATTTGCGACCCTCGATATTCTTCTCAAGACACCTCAAGCCCAAGCTTGTGCAGAGGACATTGCCATCTGGGTCAAAAAATATATTTCACTACGAGGCCACGAGTTCTCTTATTGA 1419 48.77 MPSVAVKLYSVFFKFLLKHRLQNLIQAPLDESSPFGVTSRPEETVASANPLFTDGVATKDIHIDPFTSLSIRIFLPESALTPPETDSKPSSKSSKPKPKRSNQDAQTDLVNHNVNNVQQYPSRRNSYGPSGNTREELRGSRLGGYSNEMEGLNLIQGPAPGGVYRGYAPVTENSRRLPVMLQFHGGGWVSGSNDSAANDFFCRRIAKLCDVIVVAVGYRLAPENRFPAAFEDGLKVLNWLGKQANLAECSKSMGNTKGNGNEFKKSDNHRHIVDTFGASMVEPWLAAHGDPTRCVLLGVSCGANVADYVARKAVEAGKLLDPVKVVAQVLLYPFFVGSVPTHSELKLANSYFYDKAMCLLAWKLFLPEEEFSLDHPAANPLVSGREGPPLKLMPPTLTVVAELDWMRDRAIAYSEELRKVNVDAPVLDYKDAVHEFATLDILLKTPQAQACAEDIAIWVKKYISLRGHEFSY 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 17906672 17909731 - CaPI482276_05g014600.1 Cam05g1460 126864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1460 472 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 180 196 IPR002168 GO:0016787(InterPro)
Cam05g1460 472 MobiDBLite consensus disorder prediction 79 143 - -
Cam05g1460 472 SUPERFAMILY alpha/beta-Hydrolases 164 463 IPR029058 -
Cam05g1460 472 Gene3D alpha/beta hydrolase 35 467 IPR029058 -
Cam05g1460 472 Pfam alpha/beta hydrolase fold 180 437 IPR013094 GO:0016787(InterPro)
Cam05g1460 472 PANTHER ARYLACETAMIDE DEACETYLASE 47 441 IPR050466 -
Cam05g1460 472 MobiDBLite consensus disorder prediction 103 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1460 Cam-Chr5:17906672 Cam11g0831 Cam-Chr11:10687372 3.60E-33 dispersed
Cam05g1460 Cam-Chr5:17906672 Cam02g2473 Cam-Chr2:37193817 7.90E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1460 - - - 0.0