Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam05g1494 | ATGGGTATCATCATCTCTCTCTTCTCCATCTCTATTTTCATTGTCTTCCTCTTCAGATTCCGACCACCCGCCCACGACTTTTCTACCCACTCTTCCCCGCCGACGTACCCTCTCATCGGCTGTCTCCTCTCCTTCTACATTAACCGCAACCGCCTCTTGGATTGGTACACTCAGCTCTTGTCGGAATCCGCCACCGGCACTATCGTCGTCCACCGCCTCGGCTGCAGGCGTACGGTGGTGACGGTGAACCCGGTTAACGTGGAGTATATTTTGACGACCCATTTCCTTAATTTCCCTAAAGGGAAGCCTTTCACTGAAATCTTGGGTGACTTTCTTGGCTGCGGTATTTTCAACGTTGACGGCGACCAGTGGCGGACGCAGCGGAAGCTGGCTAGTCACGAGTTTAGCGCCAAGTCTCTTCAGGAATTTGTCGTGAAGACGTTGAAGTCGGAGGTGGAGACGCGGTTGTTGCCCGCCCTCGAGGCATCGGCCGACGATGCTGCTGTCGTGGACTTGCAGGAATTACTAAGAGGATTTGCATTTCGAGTGATATGTAAGATTGTTTTGGGGGGTGAAGAAGAGACAATTTTCGCACTTGAAAAGAGCTTTGGCATAGCATCGGAGGTGAGCGCCAGGCGAGCGATGGAGCCAGTTTACGCGATATGGAAAATGAAGAGATGGTTTGGGGTTGGATCGGAGCGGCGGCTGAAGACAGCGGTGGCGGAGGTTCACCGGAATGTGATGAACATAATTGACAAAAGAAGGAGGAAGAAGAAGATGGAGGATATCCATGACAGCGAAGATCTCTTGTCAAGGTTGATCTCAATCGGGCATGACGATCAGATGATTCGAGACATGGCCATAAGCTTCATCATGGCGGGTCGAGACACGACATCAGCTGCAATGACATGGCTGTTTTGGCTACTCTCCCATCATCCCAACATAGAGAATCAATTAGTAGAAGAGATAGACTTGGAATCTGAAAAAAAATTGAACTACCAATCTCTGAAGGAGCTCAAATTTCTCAAGGCATGTCTCTGTGAAACCATGAGAATGTATCCACCAGTCCCATGGGATTCCAAGCATGCCATTGCCGACGACTACTTGCCCGACGGGACTCTAGTCCGATCTGGAGATAGAGTGACATATTTCCCCTATGGGATGGGTAGAATGGAGGGTTTGTGGGGGAAGGACCAGTTCGAGTTCAAGCCGAGCCGATGGCTCCTTGAACAAGACGGGCGTGGAGGCCGGAGAAGAGGGGTGAAATTGGTTAGTCCATACAAGTTTCCAATATTTCAAGCTGGGCCAAGGGTGTGTTTGGGGAAGGAGATGGCTTTCCTTCAGATGAAGTATGCGGTGGCTTCAATTCTCAGCCAATTCAGAATCAAACCTATTGCCGGCGACCGCCCTGTGTTTATGCCGCTGTTGACGGCGCATATGGCTGGCGGCTTCAAGGTTTTGATTCAAAGGAGAGAGAAAGAGGGCAGACAAAGAGGCAATTCAACACAAACAAACAAAGTTCCTAATTTAAACAATCAGAAGAAGAGTTGA | 1551 | 49.84 | MGIIISLFSISIFIVFLFRFRPPAHDFSTHSSPPTYPLIGCLLSFYINRNRLLDWYTQLLSESATGTIVVHRLGCRRTVVTVNPVNVEYILTTHFLNFPKGKPFTEILGDFLGCGIFNVDGDQWRTQRKLASHEFSAKSLQEFVVKTLKSEVETRLLPALEASADDAAVVDLQELLRGFAFRVICKIVLGGEEETIFALEKSFGIASEVSARRAMEPVYAIWKMKRWFGVGSERRLKTAVAEVHRNVMNIIDKRRRKKKMEDIHDSEDLLSRLISIGHDDQMIRDMAISFIMAGRDTTSAAMTWLFWLLSHHPNIENQLVEEIDLESEKKLNYQSLKELKFLKACLCETMRMYPPVPWDSKHAIADDYLPDGTLVRSGDRVTYFPYGMGRMEGLWGKDQFEFKPSRWLLEQDGRGGRRRGVKLVSPYKFPIFQAGPRVCLGKEMAFLQMKYAVASILSQFRIKPIAGDRPVFMPLLTAHMAGGFKVLIQRREKEGRQRGNSTQTNKVPNLNNQKKS | 516 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 18589961 | 18594332 | - | CaPI482276_05g014940.1 | Cam05g1494 | 126898 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam05g1494 | 516 | Gene3D | Cytochrome P450 | 28 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | MobiDBLite | consensus disorder prediction | 493 | 516 | - | - | |
| Cam05g1494 | 516 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | PRINTS | P450 superfamily signature | 293 | 310 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | PRINTS | P450 superfamily signature | 344 | 355 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | PRINTS | P450 superfamily signature | 439 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | CDD | CYP86A | 88 | 484 | - | - | |
| Cam05g1494 | 516 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | PRINTS | E-class P450 group I signature | 282 | 299 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | PRINTS | E-class P450 group I signature | 302 | 328 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | PRINTS | E-class P450 group I signature | 62 | 81 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | PRINTS | E-class P450 group I signature | 343 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | PANTHER | CYTOCHROME P450 | 17 | 484 | - | - | |
| Cam05g1494 | 516 | MobiDBLite | consensus disorder prediction | 500 | 516 | - | - | |
| Cam05g1494 | 516 | SUPERFAMILY | Cytochrome P450 | 27 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g1494 | 516 | Pfam | Cytochrome P450 | 32 | 470 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam05g1494 | Cam-Chr5:18589961 | Cam07g0071 | Cam-Chr7:1885723 | 1.40E-118 | dispersed | |
| Cam05g1494 | Cam-Chr5:18589961 | Cam06g1926 | Cam-Chr6:30215043 | 1.00E-161 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam05g1494 | K20665 | - | csv:101207598 | 845.114 |