Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1512 ATGTTTTTCCCTTGCTCCAGCGGCGGCGATGGTGGCGGAGGACTGTCGGCGTATCATCATGCCGACATGTCATCTGTTTCCGGGTCTGATATATTTGGGAATTTTCACGGCGGCGATATGGAGGTAAGTGGGGTTTTGGGGATGAAGACAGAGGTGGATGAGGCGGCGGCGGCGGTGGAAGCGGACGGCGGCGGAAAAAAGAAAGGGGAGAAGAAGGTGAGGAAACCAAGATATGCTTTTCAGACAAGAAGCCAAGTTGACATTCTTGACGATGGATATCGTTGGAGAAAATACGGTCAAAAAGCTGTCAAAAACAACAAGTTTCCTAGGAGTTATTATAGATGCACGCATCAAGGATGCAATGTGAAGAAGCAAGTGCAAAGGCTAACAAGAGATGAAGGGGTGGTGGTGACAACATATGAAGGAATGCACACACACTCCATTGATAAGCCAACAGACAACTTTGAACAAATCTTGAGTAGAATGCAGATTTATAGTACTCCTTTTTGA 510 46.67 MFFPCSSGGDGGGGLSAYHHADMSSVSGSDIFGNFHGGDMEVSGVLGMKTEVDEAAAAVEADGGGKKKGEKKVRKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTRDEGVVVTTYEGMHTHSIDKPTDNFEQILSRMQIYSTPF 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 19018391 19020944 - CaPI482276_05g015120.1 Cam05g1512 126916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1512 169 SMART WRKY_cls 89 148 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam05g1512 169 ProSiteProfiles WRKY domain profile. 84 149 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam05g1512 169 Pfam WRKY DNA -binding domain 90 146 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam05g1512 169 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 61 149 IPR044810 GO:0003700(InterPro)
Cam05g1512 169 SUPERFAMILY WRKY DNA-binding domain 81 148 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam05g1512 169 Gene3D WRKY domain 73 149 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cam05g1512 169 FunFam WRKY transcription factor 57 75 149 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0011 Cam-Chr5:608357 Cam05g1512 Cam-Chr5:19018391 1.40E-28 dispersed
Cam05g1512 Cam-Chr5:19018391 Cam07g1566 Cam-Chr7:30354969 7.90E-47 dispersed
Cam05g1512 Cam-Chr5:19018391 Cam07g0799 Cam-Chr7:20042763 5.10E-30 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51952 PF03106 WRKY 3.20E-26 CL0274 Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1512 - - - 0.0