Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1548 ATGAATGACGCAGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCGGAAGAAAAGGCCAACGAGATCTCCGTCTCTGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTCGAGGCAGAGAAGAAGAAGATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATCGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTACTACAAGCTCAGGATGATGTAGTAAACAATATGAAAGAGGCAGCATCAAAGGAGCTTCTGAATGTAAGCCAAAATGAACATGTCTACAGAAATATTTTGAAGGATCTCATTGTTCAGAGCTTGCTCCGGCTGAAAGAGCCAGCTGTTTTATTGCGATGCCGCAAAAGTGACGTCCATTTGGTGGAGTCTGTGCTGGGTTCAGCAGCTGTTGAATATGCAGAGAAAGCACAAGTTCATGAGCCAGAGATCATTGTGGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCACGGTCCTTTCTGCTCTGGAGGTGTGGTATTGGCATCTCGAGATGGGAAGATTGTCTGTGAGAACACCCTTGATGCTAGATTGGATGTTGTGTTCCGTAAAAAACTTCCAGAGATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGA 690 45.8 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNNMKEAASKELLNVSQNEHVYRNILKDLIVQSLLRLKEPAVLLRCRKSDVHLVESVLGSAAVEYAEKAQVHEPEIIVDHVHLPPGPSHHHHHGPFCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKSLFSQVAA 229
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 21203485 21206773 + CaPI482276_05g015480.1 Cam05g1548 126952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1548 229 Gene3D - 92 228 IPR038495 -
Cam05g1548 229 Pfam ATP synthase (E/31 kDa) subunit 16 224 IPR002842 GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cam05g1548 229 Gene3D - 1 62 - -
Cam05g1548 229 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 226 IPR002842 GO:0033178(InterPro)|GO:0046961(PANTHER)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cam05g1548 229 SUPERFAMILY V-type ATPase subunit E-like 87 224 - -
Cam05g1548 229 Hamap V-type proton ATPase subunit E [atpE]. 8 225 IPR002842 GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Cam05g1548 229 Coils Coil 38 61 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1548 K02150 - csv:101217221 397.512