Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1614 ATGATCACCATAATCCTCCTTCTCATCACCATCTTCCTCTTCCTCAGATTTAGAACAACATTCTCCTTCTCCGCCCAGAAAAACCTTCCTCCTGGGCCACTTGGGGTCCCATTTATAGGCCAAAGTCTCAGCCTCCTTGGAGCCATGAGAACAAACTCAGCAGAGCAATGGCTGCAGCAAAGAGTGGATAAGTACGGACCAATTTCGAAGATGACCCTGTTCGGGAAGCCGACGGTGTTTGTACATGGGGCGGCGGCGAACAAGGCAGTGGTGTTTTCAGGGGAGGAGGGGGCGGTGTCGAACCGGCAGATTGAGTCTTTGAAGAGGATTTTGGGAGAGAGGAATTTGACGGAGCTGAGTGGTGAGGATCATAAGAGAGTTAGAGGGGCACTGGTTTGGTTCTTGAGGCCTCAGAGCTTGAAAGGCTTTGTGGGGAAGATGGATGGGGAAGTTAGGAAGCATTTGGACATGTATTGGCATGGCAACAAGGAAGTCACTGTGTCGCCATTGATGAAAACTCTGACTTTTGACATCATATGCTCTCTCCTGTTTGGCATTGAAGAAGGGCCAACAAGAAAGAGCATAATAGAATGCTTCAAAACAATGGTGGATGGCATTTGGTCTGTTCCAATCAACCTGCCATTCACAAGGTATAACCAAAGCCTCAAAGCAAGTGCGAAAGCTCAACAGATATTGAAGCAAATTTTGAAAGACAGGACACAAAACCTGCAAGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATAAAGACCTAATTACTTATTTGTTTAGCATCAAGAACAAACAAAAAGAACAAGCTTTGAGTGAGGAGGAAATTGTGCACAATATCATCCTTCTAATGATTGCTGGACATGACACAACATCAATTTTGATTACTCTTATGCTTAGGGTTTTGGCTAAAAACCCAACTGTTTATGCAGCTGTTCTTCAAGAGCATGAAGAAATAGCTAGAAACAAAGAAAGTGGGGAGGCACTCACCTGGGAAGATGTTTCCAAGATGAAGTACACATGGAAAGTAGCAATGGAAACCTTGAGACTTTACCCACCTGTATTTGGAGGGTTTAGAGTGGCCCTTAAAGACATTCAATTAGGTGGATACACAATTCCAAAAGGATGGCAAATATTTTGGGCAGCACCAATGACCCATCTGGATGAGAAAATATTTGGAGACCCACAAAAGTTTGAACCAAGTAGATTTGATCAAAACCAAACACCAATCCCACCCTTTTCCTTCATTGCATTTGGTGGAGGACCCAGAATTTGCCCTGGCTATGAGTTTGCAAAGCTTGAAACTCTTGTCACTATTCATTACCTAATCACTCAATTCACTTGGAAGCTCACTTCAGAAGATTTCTTAATTAGAGATCCAACTTTGACCCCCAACAAAGGGCTCCCCATCCAAATTTATCCCAAATTATAA 1446 43.29 MITIILLLITIFLFLRFRTTFSFSAQKNLPPGPLGVPFIGQSLSLLGAMRTNSAEQWLQQRVDKYGPISKMTLFGKPTVFVHGAAANKAVVFSGEEGAVSNRQIESLKRILGERNLTELSGEDHKRVRGALVWFLRPQSLKGFVGKMDGEVRKHLDMYWHGNKEVTVSPLMKTLTFDIICSLLFGIEEGPTRKSIIECFKTMVDGIWSVPINLPFTRYNQSLKASAKAQQILKQILKDRTQNLQEEEEEEEEDDDDDKDLITYLFSIKNKQKEQALSEEEIVHNIILLMIAGHDTTSILITLMLRVLAKNPTVYAAVLQEHEEIARNKESGEALTWEDVSKMKYTWKVAMETLRLYPPVFGGFRVALKDIQLGGYTIPKGWQIFWAAPMTHLDEKIFGDPQKFEPSRFDQNQTPIPPFSFIAFGGGPRICPGYEFAKLETLVTIHYLITQFTWKLTSEDFLIRDPTLTPNKGLPIQIYPKL 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 22900513 22904612 + CaPI482276_05g016140.1 Cam05g1614 127018

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1614 481 Pfam Cytochrome P450 30 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam05g1614 481 Coils Coil 226 256 - -
Cam05g1614 481 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 SUPERFAMILY Cytochrome P450 26 479 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 PANTHER CYTOCHROME P450 26 28 455 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cam05g1614 481 FunFam Taxadiene 5-alpha hydroxylase 21 480 - -
Cam05g1614 481 Gene3D Cytochrome P450 19 479 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g1614 481 CDD CYP90-like 61 479 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1614 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1614 Cam-Chr5:22900513 Cam06g1553 Cam-Chr6:26998926 7.90E-84 dispersed
Cam05g1612 Cam-Chr5:22851671 Cam05g1614 Cam-Chr5:22900513 1.20E-169 proximal
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g491 . Blo03g01447 Bda07g00354 Bda09g00395 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi04g01210 . . . . . . . . . Bma07g01303 . . . . . . . . Cpe14g00747 . . . . . . . . Cla05g01497 Cam05g1614 . Cco05g1643 Clacu05g1597 Cmu05g1496 . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002151 6 2 2 2 2 2 1 2 2 2 2 2 1 1 2 1 2 1 1 2 2 5 1 3 2 2 1 2 1 3 60