Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1627 ATGATCTCTGCTGTGAAACAGTCTTCTAGGGGTATCCATTGCTCTGATGGTATTATTCGGAGCAAAATCTCGGTTCCCTCTCAGCGATCCTCGTTTCTTCCACCTCTTCCGGTGCAAAAACCTCCAAACTCCGCTGTTTCTTTTCATAAGGCTGTACATGTTTCTTCGCTTGAGAATTTTGGATCACTTCGGGTTCGTAAAGCTAATCTGATCAAATGTGAAGCTTACGAGGCTGAGCGATCGCAGCCGATCGAATCGAGCATTGAGTTGCCGAAAAGTCAGGTCCCTTCTGAGGCCGCGAAGAAGGTGAAAATTGGATCCTACTTCGCTCTTTGGTGGGCTTTGAACGTGGTTTTCAATATCTATAACAAGAAGGTGTTGAACGCTTACCCATATCCATGGCTGACCTCGACTCTGTCGCTTGCCGCTGGATCTCTGATCATGTTGATCTCATGGATGACGAGAATTGCCGAGGCTCCCAAAACTGACTTCGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTTGCCCATACAATTGGACATGTTGCTGCAACCGTGAGCATGTCCAAGGTTGCAGTTTCATTCACTCACATCATCAAGAGTGGTGAACCTGCTTTTAGCGTATTGGTTTCAAGGTTCTTGTTGGGTGAGACCTTCCCACTTCCTGTTTACTTGTCGCTCCTCCCGATCATCGGTGGGTGTGCTCTCGCTGCTGTGACCGAGCTCAACTTTAACATGACGGGTTTCATGGGTGCCATGATATCAAACTTGGCATTTGTATTCCGTAACATATTTTCGAAGAGAGGCATGAAAGGAAAATCTGTTAGCGGGATGAACTACTATGCATGTTTATCAATTTTGTCTTTGTTACTCTTGACGCCATTTGCATTTGCTGTGGAGGGGCCAGAATTGTGGGCTGCTGGATGGCAAACAGCAGTTTCTCAAATTGGACCTCATTTCGTTTGGTGGGTTGCAGCACAAAGTATATTCTACCATCTCTATAATCAGGTGTCTTACATGTCCTTGGATGAGATTTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCAGTCATAGTTTCTTCCATCATCATCTTCCGAACACCTGTGCAGCCAGTCAACGCTCTCGGAGCTGCCATTGCAGTTCTTGGAACCTTCATATATTCTCAGGCAAAGCAATGA 1191 45.68 MISAVKQSSRGIHCSDGIIRSKISVPSQRSSFLPPLPVQKPPNSAVSFHKAVHVSSLENFGSLRVRKANLIKCEAYEAERSQPIESSIELPKSQVPSEAAKKVKIGSYFALWWALNVVFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLISWMTRIAEAPKTDFEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPLPVYLSLLPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSILSLLLLTPFAFAVEGPELWAAGWQTAVSQIGPHFVWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFIYSQAKQ 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23270059 23273087 - CaPI482276_05g016270.1 Cam05g1627 127031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1627 396 Pfam Triose-phosphate Transporter family 104 392 IPR004853 -
Cam05g1627 396 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 104 395 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cam05g1627 396 PANTHER SOLUTE CARRIER FAMILY 35 98 395 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Cam05g1627 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 239 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1627 Cam-Chr5:23270059 Cam09g1964 Cam-Chr9:34307235 5.00E-60 dispersed
Cam01g2267 Cam-Chr1:34988228 Cam05g1627 Cam-Chr5:23270059 2.80E-156 transposed
Cam05g0285 Cam-Chr5:2740126 Cam05g1627 Cam-Chr5:23270059 9.60E-86 transposed
Cam05g2562 Cam-Chr5:33385121 Cam05g1627 Cam-Chr5:23270059 9.80E-62 transposed
Cam10g0516 Cam-Chr10:7641485 Cam05g1627 Cam-Chr5:23270059 3.40E-184 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1627 K15283 - csv:101220046 723.391