Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1636 ATGCGATGTTTGATTTTTCACACACCCTTTTGGTTGTTTTTTGTGTTGGTGTCCAATTTCAAGCTCTGTTTTTCACAAGATTACACCATTGGCGACTCTCTGCCTGCGGCGCCGCCGCCGCCGCAGCAAAATGAATGTAATGGGATTTTCTTAACCTACACGTTCTTTTCAAGGGAAAAAGAATTTCCCCATGTGAAGAATGTTTCTGCTCAGGCTTGGGCGTTCAGAGCTCAGGCCACCGTGCTGAACGCCGGCGCGACGGAGCTGGACGCTTGGAAGATGTATATTGGGTTTCAACATAGAGAGATTTTAGTGTCGGCGGCTGGTGCGGTGTTGGCGGACGGTTCGGATTTCCCCGCCGCCGTCGGGAAAGGGGTGATCTTAGCTGGATACACACAAACGGACTTGAAAACCGCCATACAAACCGCCGGAGATTATAATCAAATGCAGGTGACAATTGATATCACCGGAACCCAATTCGGCGTGAAGAAGAATGGAATTCCGATGCCGAAGACAATTCGCCTTGAAAATGAAGGCTTCAAGTGTCCGCCGCCTCGTCGTCATCGCAACAAAAGTTATATGCATGTTTGCTGCAAGAAAGACCCAAAATTGAAGCAAAAACCACCAAAGAAGACCAAGTTTTTAGGTCGACAAAACGGCGATCTCTCGCTCACCTACGACGTCATCCAAGCTTATGGGAATAACTATCTTGCACAAGTCAGCATTGACAACAACAACCCTCTTGGCCGCCTCGACCATTGGAACTTAACTTGGGAATGGATGAGAGGAGAATTCATTTCCACCATGAGAGGAGCTTACACTCACAAAATTGACTACTCTGACTGCATCTTTGGCCCTCAAGCCCAATACTATCAAGATTTTGACTTCTCCCAAATCATGAATTGTGAGAAGAACCCCATCATCGCCGACCTCCCTTCCGATCGAGCCAACGATTCCAAGGTCGGAAAGTTACCCTTCTGTTGCAACAACGGCACCATCTTACCGCCACTGATGGATCCAAGCAAAGCAAGGTCCATTTTTCAGCTCCAAGTCTATAAGCTTCCCCCTGACTTCAACAGAACAGCCTTGTACCCTCCTCAAAAATGGAAGATCAACGGCATTCTTAACCCCAATTACAAATGTGGAGCTCCTATTAGAGTTGATCCAACACAATTTCCTGACTCAACTGGACTTCAATCCATAACCACAGCCATTGCAAGTTGGCAAGTGGTTTGCAATATTACTACTCCAAAACCCAAACAATCAAGATGTTGTGTTTCTTTCTCTGCTTATTATAATGACTCTGTTATCCCTTGCAATACTTGTGCTTGTGGATGTGATCAAACTCAAACTTGCAACCCAAATTCTTCCCCATTGCTTCTTCCACCAGAGGCCCTTTTAGTTCCATTTGACAATAGAACTCTAAAGGCAAAAGCTTGGGCCAAAATCAAACACTTTCCAATTCCAAAGAAACTCCCTTGTCCTGACAATTGTGGGGTTAGTTTAAATTGGCATATAAACTCAGATTATAACAGTGGTTGGACGGCTAGAATTACCCTTTTCAATTGGGAAGAATACCCTTTTGAGGATTGGTTTGCTGCTGTTCAATTGGATAAAGCTGCTAAAGGCTATGAGAATGTCTACTCTTTCAATGGGACTAAACTCCCACCAGATATGATCAAGAACACCATCTTTTTCCAAGGATTGGAAGGTCTTAATTACCTGATGGGGGAGATGAATGGGACGGACCCGAGATTCGATCCACGAGTACCGGGAAAGCAACAATCGGTAATCTCTTTCACTAAGAAGAATTTGAGGAACCTCAATATAAAGGAAGGAGATGGATTCCCTTCAAAGGTTTATTTCAATGGAGAAGAATGTGCACTTCCTCCTCATATTCCTTTAGGAAATGATGCTGCTCACAGCCTCCATGTCAGCTCTGAACCTTTAATGCTGCTGCTCACAGTTATGGCTATTTTCATTCTCTTCATCGATGGCTTTCATTGA 2007 44.64 MRCLIFHTPFWLFFVLVSNFKLCFSQDYTIGDSLPAAPPPPQQNECNGIFLTYTFFSREKEFPHVKNVSAQAWAFRAQATVLNAGATELDAWKMYIGFQHREILVSAAGAVLADGSDFPAAVGKGVILAGYTQTDLKTAIQTAGDYNQMQVTIDITGTQFGVKKNGIPMPKTIRLENEGFKCPPPRRHRNKSYMHVCCKKDPKLKQKPPKKTKFLGRQNGDLSLTYDVIQAYGNNYLAQVSIDNNNPLGRLDHWNLTWEWMRGEFISTMRGAYTHKIDYSDCIFGPQAQYYQDFDFSQIMNCEKNPIIADLPSDRANDSKVGKLPFCCNNGTILPPLMDPSKARSIFQLQVYKLPPDFNRTALYPPQKWKINGILNPNYKCGAPIRVDPTQFPDSTGLQSITTAIASWQVVCNITTPKPKQSRCCVSFSAYYNDSVIPCNTCACGCDQTQTCNPNSSPLLLPPEALLVPFDNRTLKAKAWAKIKHFPIPKKLPCPDNCGVSLNWHINSDYNSGWTARITLFNWEEYPFEDWFAAVQLDKAAKGYENVYSFNGTKLPPDMIKNTIFFQGLEGLNYLMGEMNGTDPRFDPRVPGKQQSVISFTKKNLRNLNIKEGDGFPSKVYFNGEECALPPHIPLGNDAAHSLHVSSEPLMLLLTVMAIFILFIDGFH 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 23573549 23577238 - CaPI482276_05g016360.1 Cam05g1636 127040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1636 668 PANTHER COBRA-LIKE PROTEIN 7 11 660 - -
Cam05g1636 668 Pfam COBRA-like protein 236 415 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0747 Cam-Chr5:6491215 Cam05g1636 Cam-Chr5:23573549 3.00E-219 dispersed
Cam05g1636 Cam-Chr5:23573549 Cam06g1687 Cam-Chr6:28258485 1.60E-34 dispersed
Cam10g0521 Cam-Chr10:7721039 Cam05g1636 Cam-Chr5:23573549 1.70E-294 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1636 - - - 0.0