Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1655 ATGCCAACAGTTTGGTTTTCTCTGAAAAAGTCCTTCCCTTGCAAGCCAGAGCCATCAGAAGTCTATGATCCAAAGTGCAGGAAACAACTCAACACAATCACAACTAAGAAAGCATCCAGAAAGTCAGGTTGTTCTTCTGGAAGGTCTGGTTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGGCACATGGAAAAACCACCGATTTGCAGCCCGAGGTCGATCGGTAGCAGCGAGTTCCTCAACCCAATTGCTCATGAAGTCATACTGAGCAACTCAAAGTGTGAGCTCAAGATTACTGGTTTTGGAAGCTTCCACCAAGAGGGTGTAGGAAATGCTGGCTTTGGAGGGGGCGCAGGTGGGAACTCGCCATTTTCCGGTACACTAAGACCCGGAACTCCTGGTCCAGGGGAGCACTTTGTTAACAACTCCAGTTCTCCTTTTAGTACTACCTCCATATCTGCTGCAAGAAAGCTTCCTTCTCTTAGAGATGGGCCTGCGGCTGGGAGTACTGCTAAATCTAAGGTGGGTGGGGAAATTCATACAAGCAAAAGGTTCTCCCCGCTAACCGAACTAAACGGTAATGCATTTTCGACGGTTACTTGCCATAAATGTGGAGAGCAGTTTTGCAAATTGGAGGCTGCTGAGTCTCACCATCTCTCTAAGCATGCTGTTACCGAGCTTGTGGAAGGTGATTCATCGAGGAAAATTGTCGAAATAATATGTCGAACGAACTTGTTGAAATCAGAGAACAATGGCAACCGTATCGAACGAGTCTTCAAAGTTCACAATATGCAAAAAACGTTAGCTGGATTTGAAGAATACAGGGAAATAGTGAAGATCAAGGCAAGCAAGCTTTTGAAGAAACACCCTCGCTGCCTTGCGGATGGGAACGAGCTGCTGAGGTTTTACGGGACTACTTTAGGCTGCTCTCTTGGACTAAATGGCTCCTCCAGCCTCTGCATATCACAGAAATGCAATGTCTGCAGAATTATAAGGAATGGTTTCTCAGCAAAGAAGGATATGAAAGAAGAAGTAGGAGTTTTCACGACTTCGACGAGCGGAAAAGCTTTCGAAACCATTGAAACGACAGAAGAAAGCTCAGTAAAGAAAGCACTGATAATCTGCAGAGTGATTGCAGGGAGGGTTCATAGGCCTTTGGAGAATATACAAGATATGGTTGGCCAAACAGGGTTTGATTCTCTAGCTGGCAAAGTGGGATTACATTCCAACATTGAAGAGCTTTATTTGCTCAGTCCTAGAGCTTTGCTTCCTTGTTTTATTGTAATTTGCAAGCCATGA 1317 44.95 MPTVWFSLKKSFPCKPEPSEVYDPKCRKQLNTITTKKASRKSGCSSGRSGCSRSIANLKDVIHGSKRHMEKPPICSPRSIGSSEFLNPIAHEVILSNSKCELKITGFGSFHQEGVGNAGFGGGAGGNSPFSGTLRPGTPGPGEHFVNNSSSPFSTTSISAARKLPSLRDGPAAGSTAKSKVGGEIHTSKRFSPLTELNGNAFSTVTCHKCGEQFCKLEAAESHHLSKHAVTELVEGDSSRKIVEIICRTNLLKSENNGNRIERVFKVHNMQKTLAGFEEYREIVKIKASKLLKKHPRCLADGNELLRFYGTTLGCSLGLNGSSSLCISQKCNVCRIIRNGFSAKKDMKEEVGVFTTSTSGKAFETIETTEESSVKKALIICRVIAGRVHRPLENIQDMVGQTGFDSLAGKVGLHSNIEELYLLSPRALLPCFIVICKP 438
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 24411273 24412894 + CaPI482276_05g016550.1 Cam05g1655 127059
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1655 438 ProSitePatterns Zinc finger C2H2 type domain signature. 207 228 IPR013087 -
Cam05g1655 438 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 3 437 - -
Cam05g1655 438 FunFam C2H2-like zinc finger protein 229 437 - -
Cam05g1655 438 SUPERFAMILY ADP-ribosylation 230 437 - -
Cam05g1655 438 MobiDBLite consensus disorder prediction 120 184 - -
Cam05g1655 438 MobiDBLite consensus disorder prediction 143 162 - -
Cam05g1655 438 Gene3D - 231 427 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2294 Cam-Chr1:35148113 Cam05g1655 Cam-Chr5:24411273 2.00E-57 dispersed
Cam05g1655 Cam-Chr5:24411273 Cam10g0582 Cam-Chr10:8972982 5.70E-166 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1655 - - - 0.0