Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1704 ATGGCTATGGATGATACCGAGAGCTGTAGTAGTAGACCGGCGGATGATTTTTCGGCTCAGACTTGGAGACAGAAGCAGAAGGTTGGTGTTTACGACGAAGTTCTTCGTCGACTCAGGCTGTCGCACGAAGCGGAGACCAGCCTTCCTGGTTTCGAGGATGAACTTTGGACTCATTTTCATCGACTTCCTGCTAGGTATGCTATGGACGTCAACGTAGAGAGGGCTGAAGATGTTCTCATGCACAAAAATCTTCTCTACATGGCACATGATCCTGCTACTCGACCAGCTATTGATGTCCGTCTCGTACAGGTTCATTCATCTCCTGGCAGAAACTTTGGCAAGTCCGTTCATTCAAACTTGAAGGAAAAAGTAAACCAGCGGTTTTCTGGTTATGACAGCAATCAGAGACATCACCCCCCACCAGCATTTGGTTCAACAACAGAGGTCGAATATAGTTTTGAGACCAACCAATTACATGATATAGACCAACCTGGCACTTTCTCCTGGCCAATGCATGAAATTACAATATCAACAATTGACAAGCCAAAACTGCTCAGTCAGTTGACGTCCTTACTTTCTGAGATTGGGCTGAATATTCAAGAAGCGCATGCTTTTTCAACAACAGATGGCTTTTCCTTGGATGTTTTTGTAGTTGATGGTTGGGCAATTGAGGATACCAAGCAGCTAAAAGATATACTCGCAGAAGAAATATCAAAGATTCAGAAAAGGCATCCTCTATTTACACCTTGCATCTTCCGTACTGGGAAGCAAGACAAAATTGGAATCCAGTTCATCACAAAGTATGTCAACATTCCGAGGGACGAAGTTGATGAATGGGAAATTGATGCAACCCTGCTAGTCTTTGAGAAGAAAATTGCGTCTGGATCTCTTAGTGACTTGTATAAAGGCACCTTCTATGGTCAAGATGTGGCTATTAAGGTTCTAAAAGATGAAAACTTGAACGAGACTGTACGGCGGGAATTTGCTCAAGAAATTCATATCATGAGAAAACTTCGGCATAAGAATGTTGTCCAATTTATTGGTGCATCTACCAGGCCTCCACACTTTTTCATTGTTACAGAATACATGTCTGGTGGAAGCATACACGACTTTTTACATCAACAAAAGGGTGTTCTTAGTTTTCCTTCCTTACTAAGAGTGGCAGTTGACGTGTCCAAGGGAATGAACTATTTGCATCAAAAGAATATCATTCATAGAGATCTGAAAGCTGCAAATCTTTTGATGGATGAAGATGGGGTTGTCAAGGTAGCTGATTTTGGTGTTGCTAGAGTGCAAGCTCAATCTGGTGTGATGACTGCAGAAACTGGAACATACCGTTGGATGGCTCCAGAGGTTATTGAGCACAAACCATATGATCGTAAAGCTGATGTTTATAGCTTTGGGATAGTGTTGTGGGAGCTGCTTACAGGACAGCTGCCTTATGAGAACTTGACTCCGTTACAAGCAGCAATTGGCGTGGTCCAGAAGGGTCTGAGGCCTAAGATTCCGAGGTATGCTCATCCAATGATCGTGGATTTGCTCAAGAAATGCTGGCTGCAGGATCCATCTTTGAGACCCGAATTCTCAGAAATTACGAGACTTCTACAGCAGACATTGCTGAAGGAGGCACTTCACGTTCCTGGAACAGATTATATAATAAGAAACTTGGGAGTGACAGGTACCATCTGGAAGATGATAAAAAAATTTGGGCTGGAGAGGACGTTCTATGGAGGAGCAAGGATACGCCTACCGTGCTAG 1758 43.4 MAMDDTESCSSRPADDFSAQTWRQKQKVGVYDEVLRRLRLSHEAETSLPGFEDELWTHFHRLPARYAMDVNVERAEDVLMHKNLLYMAHDPATRPAIDVRLVQVHSSPGRNFGKSVHSNLKEKVNQRFSGYDSNQRHHPPPAFGSTTEVEYSFETNQLHDIDQPGTFSWPMHEITISTIDKPKLLSQLTSLLSEIGLNIQEAHAFSTTDGFSLDVFVVDGWAIEDTKQLKDILAEEISKIQKRHPLFTPCIFRTGKQDKIGIQFITKYVNIPRDEVDEWEIDATLLVFEKKIASGSLSDLYKGTFYGQDVAIKVLKDENLNETVRREFAQEIHIMRKLRHKNVVQFIGASTRPPHFFIVTEYMSGGSIHDFLHQQKGVLSFPSLLRVAVDVSKGMNYLHQKNIIHRDLKAANLLMDEDGVVKVADFGVARVQAQSGVMTAETGTYRWMAPEVIEHKPYDRKADVYSFGIVLWELLTGQLPYENLTPLQAAIGVVQKGLRPKIPRYAHPMIVDLLKKCWLQDPSLRPEFSEITRLLQQTLLKEALHVPGTDYIIRNLGVTGTIWKMIKKFGLERTFYGGARIRLPC 585
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 25378121 25387912 - CaPI482276_05g017040.1 Cam05g1704 127108
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1704 585 Coils Coil 223 243 - -
Cam05g1704 585 Pfam Protein tyrosine and serine/threonine kinase 287 534 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g1704 585 SUPERFAMILY Protein kinase-like (PK-like) 267 534 IPR011009 -
Cam05g1704 585 CDD STKc_MAP3K-like 292 535 - -
Cam05g1704 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 403 415 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g1704 585 Gene3D Phosphorylase Kinase; domain 1 273 364 - -
Cam05g1704 585 Gene3D - 171 244 - -
Cam05g1704 585 SUPERFAMILY ACT-like 171 238 IPR045865 -
Cam05g1704 585 ProSiteProfiles ACT domain profile. 173 249 IPR002912 -
Cam05g1704 585 SMART serkin_6 286 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g1704 585 ProSiteProfiles Protein kinase domain profile. 286 540 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g1704 585 PRINTS Tyrosine kinase catalytic domain signature 462 484 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g1704 585 PRINTS Tyrosine kinase catalytic domain signature 443 453 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g1704 585 PRINTS Tyrosine kinase catalytic domain signature 506 528 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g1704 585 PRINTS Tyrosine kinase catalytic domain signature 397 415 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g1704 585 PRINTS Tyrosine kinase catalytic domain signature 360 373 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g1704 585 PANTHER SERINE-THREONINE PROTEIN KINASE 155 539 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cam05g1704 585 FunFam Serine/threonine-protein kinase isoform 1 276 364 - -
Cam05g1704 585 Gene3D Transferase(Phosphotransferase) domain 1 365 547 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0206 Cam-Chr1:2356533 Cam05g1704 Cam-Chr5:25378121 4.20E-25 dispersed
Cam03g0708 Cam-Chr3:7946365 Cam05g1704 Cam-Chr5:25378121 2.10E-41 dispersed
Cam05g0138 Cam-Chr5:1609226 Cam05g1704 Cam-Chr5:25378121 1.20E-26 dispersed
Cam05g0554 Cam-Chr5:4914326 Cam05g1704 Cam-Chr5:25378121 3.20E-19 dispersed
Cam05g1704 Cam-Chr5:25378121 Cam10g0041 Cam-Chr10:2046164 8.40E-181 dispersed
Cam08g0911 Cam-Chr8:13792166 Cam05g1704 Cam-Chr5:25378121 7.00E-11 dispersed
Cam05g1704 Cam-Chr5:25378121 Cam01g1435 Cam-Chr1:27902183 1.30E-67 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85193 PF07714 PK_Tyr_Ser-Thr 6.60E-72 CL0016 Cam PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1704 - - - 0.0