Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1721 ATGCAAACCATTTCTTTATTTGTCTTTTTGGTTTTGGTTCTTTCCGAAAATGCTAAAATAGCTGAAGCTGCTGAAGGTGGAACAAATGGCGTTTATATTGTCTACATGGGATCCGCGTCTGCCTCCACGACTGACTTCCTTCGGCTTCTTACCTCTGTCAACAGGCGAAACGAAGTGGTACACATATATAAACATGGGTTCATAGGATTTGCAGCTCGTCTGTCAGAACAGGAAGCCCATGCCATGAGACAAAGCCCTGGAGTTGTTTCGGTTTTTCCAGATCCAATATTGAAGTTGCACACAACTCATTCATGGGATTTCTTGGTTAGTCAGACTAGCGTCAAAATCGACGCCAATCCCAAATCAGATCCCCCAACCTCTTCCTCTCAACAATATGATACCATTATCGGCATCTTGGACACTGGTATCTGGCCAGAATCGGAAAGTTTTAGTGACAAGGGTATGAGCCCAATACCGTCGAGGTGGAAAGGTACCTGCATGGTTGGCGATGACTTCACTTCCTCCAACTGTAACAGAAAAATCATTGGAGCAAGATTTTACGAAAGTTCAGACAGCGACGGGATAAGGTACCACTCACCTCGAGACGGAGCTGGACATGGCACCCACGTTGCATCAACGGCGGCCGGCAGCGCCGTGGCTAATGCATCATACTATGGCCTCGCAGAAGGGACGGCCAAGGGCGGGTCCCCCGGCTCAAGGATCGCCATGTACAGAGTCTGCGTGGCCGACGGCTGTCATGGGTCGTCAATCATGAAGGCGTTTGATGATGCCATCGCCGATGGGGTCGATGTATTGTCCTTATCTCTCGGGGCACCCTCCTACGTCAAACCAGAGTTGACGGCCGACCCTATTGCCATTGGAGCCTTTCATGCAGTTGAGAAGGGGATTACAGTTGTCTGCTCCGCTGGAAACGACGGCCCCACTTCGGGATCGGTGGTTAACGACGCACCGTGGATAATAACAGTGGCTGCCTCCACCATTGATAGGGATTTTGAGTCTGATGTTGTGTTGGGCAACAAAAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTTCAAAAGTCTCCTGTATACCCACTGATACAAGGGAAGTCAGCCAAGAAAGCGAGTGCCAGTGAAGACAGTGCAAGGATTTGTTCTGAAGACTCCATGGACGAAGCTCAAGTGAAGGGAAAGATAGTTATTTGCGAAAACAGTTTCGAAGGAGGCGGTTCTGATTGGCAAGGTCAGGCTGAAACAGTGAAGAATCTTGGAGGGGTCGGGGTAGTTTTGATTGATGACAACTCAAAATTAGTTGCAGAGAAATTTCCTTCTCCCATGACAGTTATTAGCAAAAAGGATGGTGCTGAGGTCCTCTCCTATGTTAAATCAAGCAGGAATCCAGTTGCTACAATCCTGCCCACTGTGACCATAATAAACTATAAGCCAGCGCCTGCTATAGCATACTTTTCATCCCGAGGGCCTAATCTCGCAGTATTAAACCTGATTAAGCCGGACATATCAGCACCAGGAGTGAACATTCTTGCAGCCTGGCTTGGCAATGATTCAAGCTCTACTCCACAAGCAACAAAGTCACCACTCTTCAATGTGATCTCAGGAACTTCAATGTCCTGCCCGCATGTCTCTGGCGTAGTGGCCTATGTAAAATCTCAAAACCCCACATGGAGTCCCTCAGCAATTAAATCGGCCATCATGACCACAGCAATTCAAACAAATAACTTGGGATCGCCAATGACTTTGGATACGGGATCAATAGCCACACCTTATGATTATGGGGCAGGAGAAATATCAACCAACGGAGCATTACAACCAGGACTAGTTTATGAAACTAGTACAACAGACTACTTAAACTACCTTTGCAGCCGAGGTTATAACCGGTCCACCATTAAGAGCATCTCAACTACTGTTCCTGATGGGTTTGATTGCCCCAAGAATTCAACTGTAGACTACATATCCAACATGAACTACCCATCAATTGCAGTATCCGAATTGAAAGGCAAGGAAAGCAAGAAAGTAACAAGAACGGTTACGAATGTTGGTGGTGCTGGTGAAACAGTTTACACAGTCAGCATAGACGCACCTGAGGAAGTAGATGTCAAAGTGATTCCAGACAAATTGAAATTTGGAAAGAACAATGAGAAGCAGAGTTACCAAGTGATTTTCACCCCAACTGTACCCACACTGCAGAAAGAAGTCCCTGGTTCAATAACTTGGACCAATGGAAAACATCGAGTCCGGAGTCCATTTGTCGTCACTAGTAAGAGTAGTGAGTCATAA 2301 46.54 MQTISLFVFLVLVLSENAKIAEAAEGGTNGVYIVYMGSASASTTDFLRLLTSVNRRNEVVHIYKHGFIGFAARLSEQEAHAMRQSPGVVSVFPDPILKLHTTHSWDFLVSQTSVKIDANPKSDPPTSSSQQYDTIIGILDTGIWPESESFSDKGMSPIPSRWKGTCMVGDDFTSSNCNRKIIGARFYESSDSDGIRYHSPRDGAGHGTHVASTAAGSAVANASYYGLAEGTAKGGSPGSRIAMYRVCVADGCHGSSIMKAFDDAIADGVDVLSLSLGAPSYVKPELTADPIAIGAFHAVEKGITVVCSAGNDGPTSGSVVNDAPWIITVAASTIDRDFESDVVLGNKKVIKGEGINFSALQKSPVYPLIQGKSAKKASASEDSARICSEDSMDEAQVKGKIVICENSFEGGGSDWQGQAETVKNLGGVGVVLIDDNSKLVAEKFPSPMTVISKKDGAEVLSYVKSSRNPVATILPTVTIINYKPAPAIAYFSSRGPNLAVLNLIKPDISAPGVNILAAWLGNDSSSTPQATKSPLFNVISGTSMSCPHVSGVVAYVKSQNPTWSPSAIKSAIMTTAIQTNNLGSPMTLDTGSIATPYDYGAGEISTNGALQPGLVYETSTTDYLNYLCSRGYNRSTIKSISTTVPDGFDCPKNSTVDYISNMNYPSIAVSELKGKESKKVTRTVTNVGGAGETVYTVSIDAPEEVDVKVIPDKLKFGKNNEKQSYQVIFTPTVPTLQKEVPGSITWTNGKHRVRSPFVVTSKSSES 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 25713111 25717604 + CaPI482276_05g017210.1 Cam05g1721 127125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1721 766 FunFam Subtilisin-like protease SBT1.5 133 345 - -
Cam05g1721 766 Pfam Peptidase inhibitor I9 31 100 IPR010259 -
Cam05g1721 766 ProSitePatterns Serine proteases, subtilase family, histidine active site. 206 216 IPR022398 -
Cam05g1721 766 Gene3D Peptidase S8/S53 domain 133 623 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam05g1721 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 100 IPR037045 -
Cam05g1721 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Cam05g1721 766 SUPERFAMILY Subtilisin-like 131 614 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam05g1721 766 Gene3D - 335 480 - -
Cam05g1721 766 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Cam05g1721 766 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Cam05g1721 766 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Cam05g1721 766 CDD PA_subtilisin_like 341 473 - -
Cam05g1721 766 Gene3D - 627 762 - -
Cam05g1721 766 Pfam Fibronectin type-III domain 661 759 IPR041469 -
Cam05g1721 766 Pfam PA domain 386 457 IPR003137 -
Cam05g1721 766 ProSiteProfiles Serine proteases, subtilase domain profile. 104 610 - -
Cam05g1721 766 FunFam subtilisin-like protease SBT1.5 335 480 - -
Cam05g1721 766 CDD Peptidases_S8_3 97 577 IPR034197 -
Cam05g1721 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 758 IPR045051 -
Cam05g1721 766 Pfam Subtilase family 134 585 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1721 Cam-Chr5:25713111 Cam08g1518 Cam-Chr8:21388286 1.00E-173 dispersed
Cam05g1721 Cam-Chr5:25713111 Cam10g0380 Cam-Chr10:6082266 1.80E-154 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1721 K25898 - csv:101213415 1323.92