Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g1746 ATGTTTTCCAATCCCTTGCCCTCTTTTCCTCCCTCTATTTCTCCTTCTCTATTTTCACCTGCTACTTCCTTGCCTTCATCAAACTCACCTTTGTCATTAGTAGTTCCCTCTCCTTCTCTTGCTTCCGCTTCCCCAACTCCGTCTCATGTTCATCACTCTAGTTCACAGCCATCTGAAGCTTCTGCTATCCCATCAGGACTTCTTTCCACCTCCTCTTCTCCTGTCTTAGATTCTAACGGCATCACCCTTCTTCCTTCTACTGCCACTATCCCTCCACCCTTGCCCAATGATCACACGGTTCAAAGCTGTGATTCTCCCGGGAAATTGTTGAAATTGAGCAGTGCCGACGCCGTAAAAATGGCACCCCTTGTGCGAGTTGCCGGGAGTATTCTCGTCCGCGATCGACTTCTCACGGCGGTTATCGCCGGAGCTTCCAGTCTTTCGTTCGTGGGATCGGGATTTATAGTGCTCTGTTACGTCCTCTTCAAAGAACTTCGCAAGTTCTCCTACAAGCTCGTCTTCTATCTTGCCCTATCCGATATGCTTTGCAGTTTCTTCACTATGATAGGGGATCCAGCAACAGGATTTTACTGTTATACTCAGGGCTATAGCACTCATTTCTTTTGTGTGGCATCGTTCTTGTGGACAACAACAATTGCATTCACCCTTCACCGTACTGTTGTTAGACATAAAACTGATGTCGAAGATTTGGAGGCTATGTTTCACTTGTATGTATGGGGAACATCATTAGTGTTGACTGTTATACGTTCTATTGGTAATAACCATGGACATGTGGGTACCTGGTGTTGGGCACAGTCAAGTCGTACAGGAAAGGCTGTTCACTTTATAACATTTTACATGCCACTCTGGGGTGCAATTCTCTACAATGGTATTACTTACCTTCAAGTGATACGCATGCTTAATAATGCTACCCGTATGGCAGTTGGCATCTCAGATAGGGCTTACCAGTCAGATGCAAGAGCAGACATGAAGGCTTTAAACAGATGGGGATATTATCCGCTCATCCTTATAGGGTCATGGGCTTTTGGTACAATCAACCGTATCCATGATTTTATTGAACCAGGTCATAAAATCTTTTGGCTGTCGGTTCTTGATGTTGGGTTGGCTTCTCTGATGGGCTTGTTCAATTCAATAGCATATGGTCTTAATTCTTCAGTGCGACGGGCAATTTATGAAAGAATAGACCTGTTTTGGCCTGAGAAGCTTCGAAGATGGCTCCCCAGCAATTCAAGGTTCCGAAACCAACAACAAGAAGGCGAACTGGTGCCCTTGAAAAATCTGGATCAGCCATAG 1314 45.21 MFSNPLPSFPPSISPSLFSPATSLPSSNSPLSLVVPSPSLASASPTPSHVHHSSSQPSEASAIPSGLLSTSSSPVLDSNGITLLPSTATIPPPLPNDHTVQSCDSPGKLLKLSSADAVKMAPLVRVAGSILVRDRLLTAVIAGASSLSFVGSGFIVLCYVLFKELRKFSYKLVFYLALSDMLCSFFTMIGDPATGFYCYTQGYSTHFFCVASFLWTTTIAFTLHRTVVRHKTDVEDLEAMFHLYVWGTSLVLTVIRSIGNNHGHVGTWCWAQSSRTGKAVHFITFYMPLWGAILYNGITYLQVIRMLNNATRMAVGISDRAYQSDARADMKALNRWGYYPLILIGSWAFGTINRIHDFIEPGHKIFWLSVLDVGLASLMGLFNSIAYGLNSSVRRAIYERIDLFWPEKLRRWLPSNSRFRNQQQEGELVPLKNLDQP 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 26092961 26101854 + CaPI482276_05g017460.1 Cam05g1746 127150

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g1746 437 MobiDBLite consensus disorder prediction 1 69 - -
Cam05g1746 437 Pfam Slime mold cyclic AMP receptor 140 392 - -
Cam05g1746 437 PRINTS GCR1-cAMP receptor family signature 167 182 IPR022343 -
Cam05g1746 437 PRINTS GCR1-cAMP receptor family signature 198 216 IPR022343 -
Cam05g1746 437 PRINTS GCR1-cAMP receptor family signature 371 390 IPR022343 -
Cam05g1746 437 PRINTS GCR1-cAMP receptor family signature 148 166 IPR022343 -
Cam05g1746 437 PRINTS GCR1-cAMP receptor family signature 339 357 IPR022343 -
Cam05g1746 437 Gene3D - 134 414 - -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 363 380 IPR022340 -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 215 233 IPR022340 -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 238 253 IPR022340 -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 381 397 IPR022340 -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 137 152 IPR022340 -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 154 168 IPR022340 -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 333 354 IPR022340 -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 170 192 IPR022340 -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 290 313 IPR022340 -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 200 213 IPR022340 -
Cam05g1746 437 PRINTS Putative plant GPCR, GCR1, signature 277 289 IPR022340 -
Cam05g1746 437 SUPERFAMILY Family A G protein-coupled receptor-like 135 422 - -
Cam05g1746 437 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 137 391 IPR017981 GO:0004888(InterPro)|GO:0007166(InterPro)|GO:0016020(InterPro)
Cam05g1746 437 PANTHER G PROTEIN-COUPLED RECEPTOR 157-RELATED 135 424 - GO:0004930(PANTHER)|GO:0005886(PANTHER)|GO:0007189(PANTHER)
Cam05g1746 437 MobiDBLite consensus disorder prediction 15 69 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g1746 K22987 - - csv:101216480 629.787
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g174 Blo01g01438 . Bda01g00644 . . Bpe02g00515 . Bma01g02189 . . Cma01g01606 . Car09g00321 . . . Cpe06g00265 . . . . . . . Cla05g01637 Cam05g1746 Cec05g1756 Cco05g1812 Clacu05g1738 Cmu05g1623 Cre05g1750 Cone4ag1705 Cone7ag1621 . . Lsi04g01377 . . . . . . . . . . . Sed13g1922 Cmo01g01688 Cmo09g00373 Cma09g00372 . Car01g01310 . . Cpe02g00297 Bhi09g03068 Tan01g3494 Cmetu07g1418 . . . . . . . . . . . . . . Cme07g00168
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004383 1 3 1 1 1 1 3 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 0 1 1 1 2 6 1 42