Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2021 ATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGGCACATTGTCAGGCTCCGACAAATGCTCCGACGGTGGCGCAACAAGGCTAGAATGTCCGCTAATCGCATCCCTTCCGACGTACCCGCCGGACATGTGGCTGTCTGTGTCGGAACCAGCTGCCGGCGCTTCGTCGTCCGGGCCACTTACTTGAACCACCCGGTTTTCAAGAAGCTTCTGGTTCAAGCCGAAGAGGAGTACGGGTTCACCAATCAAGGCCCTTTGGCAATTCCTTGCGAAGAGTCGGTATTTGAAGAAGTCATCCGGTTCATCTCCAGATCCGAGTCTCCCAACTCGGGTCGGTTCGTGAAATTGGACGATTTTCAAAGTTATTGTCATATCGGAATCAGAACCGGGCTCGATTTATGGCCGGAATCCCGGCCTTTGCTTCATGGGTTGGCCGAGAAATCCATTTGCTCCGGAGAATGCTTATGGAGATGGCAAAACTGGTGGAGGGATCATTTCACCGTGTCGTCCCGAGCCCGAATCGGAGTCGGGGCGAAACCGAGAAGGAAGAAGAACAACAACGACAACAGAGAAAGTGTTGCTAATTTGGCCAGAGGTCTATTTTCTGTAAATTAA 615 52.2 MSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSCRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCEESVFEEVIRFISRSESPNSGRFVKLDDFQSYCHIGIRTGLDLWPESRPLLHGLAEKSICSGECLWRWQNWWRDHFTVSSRARIGVGAKPRRKKNNNDNRESVANLARGLFSVN 204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 28939060 28939962 - CaPI482276_05g020210.1 Cam05g2021 127425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2021 204 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 101 IPR003676 GO:0009733(InterPro)
Cam05g2021 204 Pfam Auxin responsive protein 16 102 IPR003676 GO:0009733(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0478 Cam-Chr2:5418765 Cam05g2021 Cam-Chr5:28939060 3.40E-49 dispersed
Cam05g2021 Cam-Chr5:28939060 Cam11g0404 Cam-Chr11:5424191 1.40E-45 dispersed
Cam05g2021 Cam-Chr5:28939060 Cam04g0802 Cam-Chr4:22345321 4.30E-15 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2021 K14488 - csv:101216342 301.597