Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2103 ATGGTTACGTTACCAGAGATTAGGTTGAGTATTTGTAGTGTATTGGAGAAATGGGAAGAGATGAAGGGAGGGAAGGAGGAGTTTGAATTAGATGTCCATAAACAACTCCGTCTCCTTTCAGCAGACATAAGAATGGAAACCACTGCAAATCTATTAACTTGGGCACTTCTACCACTAGCACAACATCAAGAATGGCAACGCCGAGCTAGAGAAGAAGTCATCAAAGTTTGCGGCCACAAGACACCCCCTTCGTCTAACCATTTAACTCAACTTAAACTAATGAGTATGATAATCAATGAAACACTTCGACTTTATCCTCCAGCGTTGTTGTTGGGGCCGCGGATAACAAAAGGAATGCCTCTAGGAAGCATCGATGTTCCGAAAGGCATACAACTTCAAATTGTAGTGGCTGCAATCCACCACGACAAAGAGATTTGGGGAGAAGATGCAAGCGAATTCAACCCTCTGAGATCTAGTGCACCTAGGAAGCATCTGGCTTCATTTATGCCATTTGGTTTGGGTCCTAGAATTTGTGTAGGCCAACATTTGGCTTTGATTGAGGCCAAAGTTGCATTGGCTATGATAATTCAACGGTTCTCTTTTACGATCTCTCCAACCTACATGCATGCCCCTATGATGTTGGTAACCTTACAACCTCAGTTTGGTGTTCAACTCCTCATTAAGAGCTTATGGAATTGA 699 42.92 MVTLPEIRLSICSVLEKWEEMKGGKEEFELDVHKQLRLLSADIRMETTANLLTWALLPLAQHQEWQRRAREEVIKVCGHKTPPSSNHLTQLKLMSMIINETLRLYPPALLLGPRITKGMPLGSIDVPKGIQLQIVVAAIHHDKEIWGEDASEFNPLRSSAPRKHLASFMPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTISPTYMHAPMMLVTLQPQFGVQLLIKSLWN 232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 29554734 29555964 + CaPI482276_05g021030.1 Cam05g2103 127507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2103 232 PRINTS E-class P450 group I signature 52 78 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2103 232 PRINTS E-class P450 group I signature 178 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2103 232 PRINTS E-class P450 group I signature 168 178 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2103 232 PRINTS E-class P450 group I signature 95 113 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2103 232 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 171 180 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam05g2103 232 PRINTS P450 superfamily signature 178 189 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2103 232 PRINTS P450 superfamily signature 96 107 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2103 232 PRINTS P450 superfamily signature 43 60 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2103 232 PRINTS P450 superfamily signature 169 178 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2103 232 PANTHER CYTOCHROME P450 FAMILY MEMBER 45 223 IPR050665 GO:0004497(PANTHER)
Cam05g2103 232 Pfam Cytochrome P450 45 207 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2103 232 SUPERFAMILY Cytochrome P450 45 228 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2103 232 Gene3D Cytochrome P450 44 230 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2103 Cam-Chr5:29554734 Cam05g2106 Cam-Chr5:29567975 1.20E-90 dispersed
Cam05g2103 Cam-Chr5:29554734 Cam05g2104 Cam-Chr5:29558630 1.20E-90 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2103 - - - 0.0