Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2106 ATGTATATTCTTGTGGTTTTGGGTCTTCTTTTTGTCGGAATCGTCTTCAAATTTGTGTACTCCAATTTATGGGTTCCATGGAGAATTCAAATCCACTTCCGAAAACAGGGCATAACAGGGCCTTCCTACCGTCCGATCATCGGTAACGCCACCGATATCCGCCGTCTGTACAAGGAGGCGAATGCGAAACCAATTCCGCTGACCCACAATATAGTGTGTCGGGTGCTGCCTTATATTCACCGGTGGTCCGAGGAGTACGGGAAGATGTTTGTGTATTGGTTCGGGTCGAAACCGAGGTTGGCGATATCCGACCCAGAAATGATTAAGGAGGTGCTTACCAATACGGGTGGGCCTTTTAGAAAGGTCGGGTTCACCCCGGTTTCCAAGTTGCTGTTTGGAGAAGGACTTGTTGGACTCGAGGGCGAACAATGGGTCGTCCACCGGAGAATCGCAAATCAAGCTTTCACTATCGACCGTGTGAAGGGGTGGTTACCAGAGATTGCGTTGAGTGTTTGTAATGTGTTGGAGAAATGGGAAGAGATGAAGGGAGGAAGGGAGGAGTTTGAATTAGATGTCCATAAACAACTTCGTCTCCTCACAGCAGACGTAATTTCAAGAACTGCTTTTGGAAGTAATTTTGAAGAAGGCAAACGCATTTTCAATTTGCAAGAACAACAAATGCATCATTTTCTCCAGGCCGTCTCAAGTGTTTATATTCCAGGCTACAGATTTTTGCCTACCAAGGGGAATAGAGAGAGGGAGAGGCTGGAAAAAGAAACTCGTGCATCAATAAAAGCACTAGTCGAAAGTGAGAAAAATAGCAAAGAAAGGGAAGACTCAACAAATCTACTCAGCCTCTTACTGTCATCTTACAAGAACCAAAATGGGGAAATAGAAAAACTTGGAGTGGAGGAAGTTGTAAATGAATGCAAGACATTCTACTTTGCAGGGATGGAAACAACTGCCAATCTTTTAACTTGGGCCCTTTTACTACTAGCACAGCATCAAGAATGGCAAGATCGAGCTCGACAAGAAGTCGTCAATGTTTGCGGCCACAAGACACCGCCCGTGGCCGATAATCTAACTGAACTTAAACTAGTGGGTATGATAGTCAATGAAACACTTCGACTTTATCCTCCTGCGGTGATGATGATGCGACGGACAACAAAACGGTTGACACTAGGAAAGGTCGACGTGCCAGAAGGCACACAACTTCAACTTTCAATTGCTGCAATCCACCATGACACAGAGCTTTGGGGAGAAGATGCGAGCAGCTTCAACCCTATGAGATTTAGTGAGCCTAGGAAGCATCTAGCTTCATTTTTGCCATTTGGATTGGGTCCAAGAATTTGTGTAGGGCAACATTTGGCTCTGATTGAGGCCAAAGTTGCATTGGCTATGATAATTCAGCGATTCTCTTTTACGATTTCCCCAACCTACACGCATGCCCCTATGATGTTTGTAAGCTTAAACCCTCAATTTGGTGTTCAACTCCTCGTTAGGAGCTTATGGAATTGA 1518 44.99 MYILVVLGLLFVGIVFKFVYSNLWVPWRIQIHFRKQGITGPSYRPIIGNATDIRRLYKEANAKPIPLTHNIVCRVLPYIHRWSEEYGKMFVYWFGSKPRLAISDPEMIKEVLTNTGGPFRKVGFTPVSKLLFGEGLVGLEGEQWVVHRRIANQAFTIDRVKGWLPEIALSVCNVLEKWEEMKGGREEFELDVHKQLRLLTADVISRTAFGSNFEEGKRIFNLQEQQMHHFLQAVSSVYIPGYRFLPTKGNRERERLEKETRASIKALVESEKNSKEREDSTNLLSLLLSSYKNQNGEIEKLGVEEVVNECKTFYFAGMETTANLLTWALLLLAQHQEWQDRARQEVVNVCGHKTPPVADNLTELKLVGMIVNETLRLYPPAVMMMRRTTKRLTLGKVDVPEGTQLQLSIAAIHHDTELWGEDASSFNPMRFSEPRKHLASFLPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTISPTYTHAPMMFVSLNPQFGVQLLVRSLWN 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 29567975 29569837 + CaPI482276_05g021060.1 Cam05g2106 127510
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2106 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam05g2106 505 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PRINTS E-class P450 group I signature 107 128 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 Pfam Cytochrome P450 79 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 SUPERFAMILY Cytochrome P450 34 501 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2106 505 PANTHER CYTOCHROME P450 FAMILY MEMBER 19 496 IPR050665 GO:0004497(PANTHER)
Cam05g2106 505 Gene3D Cytochrome P450 28 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2102 Cam-Chr5:29553529 Cam05g2106 Cam-Chr5:29567975 1.30E-21 dispersed
Cam05g2103 Cam-Chr5:29554734 Cam05g2106 Cam-Chr5:29567975 1.20E-90 dispersed
Cam05g2106 Cam-Chr5:29567975 Cam11g0267 Cam-Chr11:4179852 2.30E-118 dispersed
Cam05g2104 Cam-Chr5:29558630 Cam05g2106 Cam-Chr5:29567975 6.80E-296 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2106 - - - 0.0