Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam05g2123 | ATGGAAGCATCTTCCGGCGGAATGTTAATCGGTGTTCTCTTGTTTTTCTATGCTCTCTATTGGGCTTTATATGGAAGATTATTCAGTTCTCAACGACGGAATAAGAAACTGCAGCCACCGATAGCCGGTGGCGCTTGGCCGGTGATCGGCCATCTTCATCTCCTAACTGGCTATGAACCAACATACAAAATCTTGGGGAAAATGGCAGATGTTTATGGTCCAATTTTTAGGCTGAAAATGGGAAGGCATAGAGCAGTGGTTGTAAGCAATTGGGAAATAGCCAAAGAATGTTTTACTACAAAAGACAGAGTATTTGCCTCTCGGCCCAAACTTGTAGCCGCAACTCATATGGGCTACAATAATACCATGTTTGCATTCACCCAATACGGCTCATTATGGCGCCATCTCCGCAAAATAACCACCCATGAAATCCTCTCAAATCACCGCCTTGACCTTTTCCAACACGTCCGCAGGTCAGAGGTTCAAAGCTCCGTTAAGAAACTCTATGAGTTGTGGGTCAAGGGTGGAGGCGAAACAGTGTTGGTGGAGATGAATAAATGGTTTGGAGATTTGACTTTGAACATCATATTTAGGGTGGTGGTTGGAAAGCGATTTACAACTACTTTTGAAGGGAGCGGTGGCGAGGGCGAGCAATTTCGAGAGGCGTTGAAGGATTTTTTTGAATTGTTTGGGGCTTTTGTTCCGTCGGATTCGTTTCCATTTGTGAGTTGGTTGGATTTGGGAGGGTATGAAAAGGCTATGAAGAAGACAGCTAAAGTTCTGGACAAGACGCTTCATAAATGGCTTATAGAACATCAGCGAAAGAGAGATTATAATAATTGTGATGTAGTACTGGAGAAGGAAGAAGATTTTATGGATATGATGTTGTCCAATGTTCAGGATGTTCAAGAACTCAGTGGCTATGATGTTGGTACTATCACCCAATCCTCATGCTTGACTCTGATATTAGGGGGAGCAGAGAGTACACAAGTAACTATGACATGGGCTCTTTCTTTGCTCCTCAATCACCAAGATACATTAAGGAAGGCTCAACTTGAGCTAGACGAACAAGTGGGTAGAGAGAGGTTGGTAGCAGAGTCGGATGTGAAAAAATTGTTGTATCTCCAAGCTATTGTGAAGGAAACAATGCGTTTATACCCTGCTGCACCACTTGCAGGCCTACATGAGGCCATGGAAGATTGTACTGTTGTTGGTTACCATATTCCTATAAGGACACGTCTAATAGTGAATCTCAAAAAGCTTCAAAGAGACCCGCTTGTATGGGAAGATCCTAATGAATTTCGACCGGAGAGATTTCTTACGACACATAAGGATTTCGATGTCAAAGGACAAAATCCCCAATTGATACCTTTTGGAAGTGGTCGAAGGATGTGTCCAGGAGTTTCGTTTGCCAATCAAGTTATGCATCTAACGCTTGCAAATTTGCTTCATGGGTTTGAAATTGGAAGACCATCTCAAGAGCTAATCAATATGGAAGAAAGTATTGGATTAACTAGTGCAAAAACAACCCCACTTGAAGTTGTTTTAACTCCACGTCTTCATGCTCAAGTTTATGTGTAA | 1581 | 42.5 | MEASSGGMLIGVLLFFYALYWALYGRLFSSQRRNKKLQPPIAGGAWPVIGHLHLLTGYEPTYKILGKMADVYGPIFRLKMGRHRAVVVSNWEIAKECFTTKDRVFASRPKLVAATHMGYNNTMFAFTQYGSLWRHLRKITTHEILSNHRLDLFQHVRRSEVQSSVKKLYELWVKGGGETVLVEMNKWFGDLTLNIIFRVVVGKRFTTTFEGSGGEGEQFREALKDFFELFGAFVPSDSFPFVSWLDLGGYEKAMKKTAKVLDKTLHKWLIEHQRKRDYNNCDVVLEKEEDFMDMMLSNVQDVQELSGYDVGTITQSSCLTLILGGAESTQVTMTWALSLLLNHQDTLRKAQLELDEQVGRERLVAESDVKKLLYLQAIVKETMRLYPAAPLAGLHEAMEDCTVVGYHIPIRTRLIVNLKKLQRDPLVWEDPNEFRPERFLTTHKDFDVKGQNPQLIPFGSGRRMCPGVSFANQVMHLTLANLLHGFEIGRPSQELINMEESIGLTSAKTTPLEVVLTPRLHAQVYV | 526 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 29699756 | 29706251 | - | CaPI482276_05g021230.1 | Cam05g2123 | 127527 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam05g2123 | 526 | CDD | CYP82 | 73 | 519 | - | - | |
| Cam05g2123 | 526 | PRINTS | P450 superfamily signature | 456 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | P450 superfamily signature | 465 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | P450 superfamily signature | 324 | 341 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | P450 superfamily signature | 377 | 388 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | E-class P450 group I signature | 376 | 394 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | E-class P450 group I signature | 191 | 209 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | E-class P450 group I signature | 455 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | E-class P450 group I signature | 417 | 441 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | E-class P450 group I signature | 333 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | E-class P450 group I signature | 93 | 114 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PRINTS | E-class P450 group I signature | 465 | 488 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | PANTHER | CYTOCHROME P450 82C3-RELATED | 14 | 522 | IPR050651 | - | |
| Cam05g2123 | 526 | FunFam | Cytochrome P450 82C4 | 29 | 517 | - | - | |
| Cam05g2123 | 526 | Gene3D | Cytochrome P450 | 26 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | Pfam | Cytochrome P450 | 45 | 501 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | SUPERFAMILY | Cytochrome P450 | 45 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2123 | 526 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 458 | 467 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam05g2123 | Cam-Chr5:29699756 | Cam05g2131 | Cam-Chr5:29764070 | 3.30E-192 | dispersed | |
| Cam05g2123 | Cam-Chr5:29699756 | Cam05g2125 | Cam-Chr5:29713044 | 8.10E-199 | proximal | |
| Cam01g2180 | Cam-Chr1:34458311 | Cam05g2123 | Cam-Chr5:29699756 | 3.60E-122 | transposed | |
| Cam07g0725 | Cam-Chr7:16156284 | Cam05g2123 | Cam-Chr5:29699756 | 1.70E-172 | transposed | |
| Cam01g1962 | Cam-Chr1:32936424 | Cam05g2123 | Cam-Chr5:29699756 | 3.80E-79 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam05g2123 | - | - | - | 0.0 |