Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam05g2130 | ATGGAATCTTCTCAACTCTCTTCATCGGCCACCGCCATTGCCGGAATCTTCTCCCTTCTCCTCTTTCTCTATGCTCTCTTCAACATATCTACAAGAATCGTCGGAGCTCATCGAAATAAACTCCCACCCGAACCCGTCGGTCGTTGGCCATTGATCGGTCACCTCCATTTGCTAAGTGCAACAGAGCCAGCTCACATAACCTTTGCAAAGATGGCAGATACTTACGGACCCATCTTCACGTTGAAATTGGGTATGAACAAAGCCTTGATTGTGAGCAGTTGGGAAATAGCAAAAGAGTGTTTTACTACAAACGATAGAATCTTTGCCTCTCGTCCAAAGCTCGTGGCCTCAAAGTTGTTGGGATATAACTCTACCATGTTGGGGTTGAGCCCATATGGTCCACACTGGCGCCATGTTCGCAAACTAACCATGCTCCAACTCTTAACTAATCACCGCCTCGACCAACTCCAACACATAAGAGTATTCGAAGTCCAGACTTCGATTAAGAAGCTGTATGAGTTATGTATCAAAAACAAGAATAATAATGAGAAGAAAGCGTTGGTGGAGATGAATACATGGTTTGGGGATATAACTCTAAACACAATATTTAGGATAGTGGTTGGAAAGAGATTCTCAACGGCGGTGGATGGGAGTGGTAATGATAATGAAGAGTATCGGAAGGCGTTGAGGGATTTCTTTGAATGGTTTGGAGTGTTTGTACCTTCAGATTCATTTCCATTTCTCAAGTGGTTGGATTTGGGAGGACATGAGAAGGCCATGAAGAAGACGGCTAAAATTCTTGACCAAGTGTTTGATAAATGGCTTCAAGAACATCGACAAAGGAAGAATTTTGAGGAGCATGACTTCATGGATGTGATGCTTTCTAATGTTGAAGATGGTGGAGAACAACTTTCATGCGATGCAGATACAATTATCAAGTCTTCATGTTTGGCTCTCATACTGGCGAGTTCTGATACTACAACCGTAACTATGATATGGGCCCTTTCTTTATTGCTCAACAATCAAGAAGCACTCAAGAGAGCTCAACTTGAATTAGATGAACAAGTTGGGAGGCACAAACAAGTTAAAGAATCGGATGTAAGAAATCTTAAATATCTCCAAGCAATTGTGAAGGAAACATTGCGTTTATATCCTGCAGGACCACTTGGAGTTCCTCATGAATCTATGGAAGATTGTAAAATTGTTGGCTACCATATTCCCGCAGGGACACGTCTCATTGTGAATATACAGAAGCTTCAAAGAGACCCACTTGTATGGGAAGATCCTTGTGAATTTCGACCAGAAAGATTTCTAACAAGTCACAAAGATTTCGAAGTTAGAGGAAAAAGCCCCCAATTTATACCATTTGGAAATGGGCGCAGGATGTGTCCAGGAATCTCATTTGCCCTTCAAATTGTGCATTTAACACTTGCAAATCTACTTCATGGGTTTGAGATTGAAAGGCCATCTAAAGAGTTACTCAATATGGAAGAAAGTGCTGAAGAGTGTACAATTCCTGGCTACTACACCCTTGCAAAAACACGACTTATGGTGAATGTTCATAAGTTCCAAAGAGACCCATTTGCATTGAAGGATCATTGTGAATTTCAACCTAAAAAATTTCTTGCCACTGCAAAAGATTTTGACATTAAAGGACAAAATCCTCAACTAATACCATTTAGTAGTGGGCAAAGGATGTACCCAGGAGTTTCAATCTTCGCATCCCGCCCGAAAGCTTTAGCCTCAGAGCTGCTAGGCTACAACTATGCAGCAATGGAGGTTAGCCAGTATGGCCCATACTGGCGCCATATTCGCAAAATAATCACACTCGAACTCCTCACAAACCACCGCCTCGAGCAGTGCCAACACATTAGAATATCCGAGGTTCAAACTTCGATCAAGAAACTGTATGAGTTATGTGGGGATGGCAGAAATAATAACAAGGGAACAATGGAGATGAAGACGTGGTTTGAGGAGCTAACAATGAGTATAATATTGAGGATAATGGTAGGAAAGGGATTCAGCTCGGCTTTTGAAGGCAGTGTTGGGGAGCAGTTTCGAGGAGCGTTGAGGGATCTTCTTTATCTGTTTGGGGCATTTGTTCCTTCAGATTCGTTTCCGTTTCTAAGTTGGTTGGATTTAGGAGGGTATAAGAAAGCCATGAAGAAGACGGCGAAGGTGTAG | 2184 | 42.22 | MESSQLSSSATAIAGIFSLLLFLYALFNISTRIVGAHRNKLPPEPVGRWPLIGHLHLLSATEPAHITFAKMADTYGPIFTLKLGMNKALIVSSWEIAKECFTTNDRIFASRPKLVASKLLGYNSTMLGLSPYGPHWRHVRKLTMLQLLTNHRLDQLQHIRVFEVQTSIKKLYELCIKNKNNNEKKALVEMNTWFGDITLNTIFRIVVGKRFSTAVDGSGNDNEEYRKALRDFFEWFGVFVPSDSFPFLKWLDLGGHEKAMKKTAKILDQVFDKWLQEHRQRKNFEEHDFMDVMLSNVEDGGEQLSCDADTIIKSSCLALILASSDTTTVTMIWALSLLLNNQEALKRAQLELDEQVGRHKQVKESDVRNLKYLQAIVKETLRLYPAGPLGVPHESMEDCKIVGYHIPAGTRLIVNIQKLQRDPLVWEDPCEFRPERFLTSHKDFEVRGKSPQFIPFGNGRRMCPGISFALQIVHLTLANLLHGFEIERPSKELLNMEESAEECTIPGYYTLAKTRLMVNVHKFQRDPFALKDHCEFQPKKFLATAKDFDIKGQNPQLIPFSSGQRMYPGVSIFASRPKALASELLGYNYAAMEVSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEMKTWFEELTMSIILRIMVGKGFSSAFEGSVGEQFRGALRDLLYLFGAFVPSDSFPFLSWLDLGGYKKAMKKTAKV | 727 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 29751294 | 29759041 | - | CaPI482276_05g021300.1 | Cam05g2130 | 127534 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam05g2130 | 727 | FunFam | Cytochrome P450 82C4 | 34 | 501 | - | - | |
| Cam05g2130 | 727 | Gene3D | Cytochrome P450 | 498 | 572 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | Gene3D | Cytochrome P450 | 31 | 497 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | SUPERFAMILY | Cytochrome P450 | 42 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | P450 superfamily signature | 454 | 463 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | P450 superfamily signature | 322 | 339 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | P450 superfamily signature | 375 | 386 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | SUPERFAMILY | Cytochrome P450 | 500 | 569 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | Coils | Coil | 345 | 365 | - | - | |
| Cam05g2130 | 727 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 456 | 465 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam05g2130 | 727 | Gene3D | Cytochrome P450 | 573 | 727 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | E-class P450 group I signature | 311 | 328 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | E-class P450 group I signature | 415 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | E-class P450 group I signature | 463 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | E-class P450 group I signature | 96 | 117 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | E-class P450 group I signature | 374 | 392 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | E-class P450 group I signature | 453 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | E-class P450 group I signature | 72 | 91 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | E-class P450 group I signature | 197 | 215 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PRINTS | E-class P450 group I signature | 331 | 357 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | SUPERFAMILY | Cytochrome P450 | 572 | 723 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | PANTHER | CYTOCHROME P450 82C3-RELATED | 493 | 571 | IPR050651 | - | |
| Cam05g2130 | 727 | Pfam | Cytochrome P450 | 43 | 495 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2130 | 727 | Pfam | Cytochrome P450 | 596 | 724 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam05g2130 | Cam-Chr5:29751294 | Cam05g2134 | Cam-Chr5:29784176 | 1.60E-189 | dispersed | |
| Cam05g2129 | Cam-Chr5:29741525 | Cam05g2130 | Cam-Chr5:29751294 | 5.10E-177 | tandem | |
| Cam05g2130 | Cam-Chr5:29751294 | Cam05g2131 | Cam-Chr5:29764070 | 2.80E-234 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam05g2130 | - | - | - | 0.0 |