Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2130 ATGGAATCTTCTCAACTCTCTTCATCGGCCACCGCCATTGCCGGAATCTTCTCCCTTCTCCTCTTTCTCTATGCTCTCTTCAACATATCTACAAGAATCGTCGGAGCTCATCGAAATAAACTCCCACCCGAACCCGTCGGTCGTTGGCCATTGATCGGTCACCTCCATTTGCTAAGTGCAACAGAGCCAGCTCACATAACCTTTGCAAAGATGGCAGATACTTACGGACCCATCTTCACGTTGAAATTGGGTATGAACAAAGCCTTGATTGTGAGCAGTTGGGAAATAGCAAAAGAGTGTTTTACTACAAACGATAGAATCTTTGCCTCTCGTCCAAAGCTCGTGGCCTCAAAGTTGTTGGGATATAACTCTACCATGTTGGGGTTGAGCCCATATGGTCCACACTGGCGCCATGTTCGCAAACTAACCATGCTCCAACTCTTAACTAATCACCGCCTCGACCAACTCCAACACATAAGAGTATTCGAAGTCCAGACTTCGATTAAGAAGCTGTATGAGTTATGTATCAAAAACAAGAATAATAATGAGAAGAAAGCGTTGGTGGAGATGAATACATGGTTTGGGGATATAACTCTAAACACAATATTTAGGATAGTGGTTGGAAAGAGATTCTCAACGGCGGTGGATGGGAGTGGTAATGATAATGAAGAGTATCGGAAGGCGTTGAGGGATTTCTTTGAATGGTTTGGAGTGTTTGTACCTTCAGATTCATTTCCATTTCTCAAGTGGTTGGATTTGGGAGGACATGAGAAGGCCATGAAGAAGACGGCTAAAATTCTTGACCAAGTGTTTGATAAATGGCTTCAAGAACATCGACAAAGGAAGAATTTTGAGGAGCATGACTTCATGGATGTGATGCTTTCTAATGTTGAAGATGGTGGAGAACAACTTTCATGCGATGCAGATACAATTATCAAGTCTTCATGTTTGGCTCTCATACTGGCGAGTTCTGATACTACAACCGTAACTATGATATGGGCCCTTTCTTTATTGCTCAACAATCAAGAAGCACTCAAGAGAGCTCAACTTGAATTAGATGAACAAGTTGGGAGGCACAAACAAGTTAAAGAATCGGATGTAAGAAATCTTAAATATCTCCAAGCAATTGTGAAGGAAACATTGCGTTTATATCCTGCAGGACCACTTGGAGTTCCTCATGAATCTATGGAAGATTGTAAAATTGTTGGCTACCATATTCCCGCAGGGACACGTCTCATTGTGAATATACAGAAGCTTCAAAGAGACCCACTTGTATGGGAAGATCCTTGTGAATTTCGACCAGAAAGATTTCTAACAAGTCACAAAGATTTCGAAGTTAGAGGAAAAAGCCCCCAATTTATACCATTTGGAAATGGGCGCAGGATGTGTCCAGGAATCTCATTTGCCCTTCAAATTGTGCATTTAACACTTGCAAATCTACTTCATGGGTTTGAGATTGAAAGGCCATCTAAAGAGTTACTCAATATGGAAGAAAGTGCTGAAGAGTGTACAATTCCTGGCTACTACACCCTTGCAAAAACACGACTTATGGTGAATGTTCATAAGTTCCAAAGAGACCCATTTGCATTGAAGGATCATTGTGAATTTCAACCTAAAAAATTTCTTGCCACTGCAAAAGATTTTGACATTAAAGGACAAAATCCTCAACTAATACCATTTAGTAGTGGGCAAAGGATGTACCCAGGAGTTTCAATCTTCGCATCCCGCCCGAAAGCTTTAGCCTCAGAGCTGCTAGGCTACAACTATGCAGCAATGGAGGTTAGCCAGTATGGCCCATACTGGCGCCATATTCGCAAAATAATCACACTCGAACTCCTCACAAACCACCGCCTCGAGCAGTGCCAACACATTAGAATATCCGAGGTTCAAACTTCGATCAAGAAACTGTATGAGTTATGTGGGGATGGCAGAAATAATAACAAGGGAACAATGGAGATGAAGACGTGGTTTGAGGAGCTAACAATGAGTATAATATTGAGGATAATGGTAGGAAAGGGATTCAGCTCGGCTTTTGAAGGCAGTGTTGGGGAGCAGTTTCGAGGAGCGTTGAGGGATCTTCTTTATCTGTTTGGGGCATTTGTTCCTTCAGATTCGTTTCCGTTTCTAAGTTGGTTGGATTTAGGAGGGTATAAGAAAGCCATGAAGAAGACGGCGAAGGTGTAG 2184 42.22 MESSQLSSSATAIAGIFSLLLFLYALFNISTRIVGAHRNKLPPEPVGRWPLIGHLHLLSATEPAHITFAKMADTYGPIFTLKLGMNKALIVSSWEIAKECFTTNDRIFASRPKLVASKLLGYNSTMLGLSPYGPHWRHVRKLTMLQLLTNHRLDQLQHIRVFEVQTSIKKLYELCIKNKNNNEKKALVEMNTWFGDITLNTIFRIVVGKRFSTAVDGSGNDNEEYRKALRDFFEWFGVFVPSDSFPFLKWLDLGGHEKAMKKTAKILDQVFDKWLQEHRQRKNFEEHDFMDVMLSNVEDGGEQLSCDADTIIKSSCLALILASSDTTTVTMIWALSLLLNNQEALKRAQLELDEQVGRHKQVKESDVRNLKYLQAIVKETLRLYPAGPLGVPHESMEDCKIVGYHIPAGTRLIVNIQKLQRDPLVWEDPCEFRPERFLTSHKDFEVRGKSPQFIPFGNGRRMCPGISFALQIVHLTLANLLHGFEIERPSKELLNMEESAEECTIPGYYTLAKTRLMVNVHKFQRDPFALKDHCEFQPKKFLATAKDFDIKGQNPQLIPFSSGQRMYPGVSIFASRPKALASELLGYNYAAMEVSQYGPYWRHIRKIITLELLTNHRLEQCQHIRISEVQTSIKKLYELCGDGRNNNKGTMEMKTWFEELTMSIILRIMVGKGFSSAFEGSVGEQFRGALRDLLYLFGAFVPSDSFPFLSWLDLGGYKKAMKKTAKV 727
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 29751294 29759041 - CaPI482276_05g021300.1 Cam05g2130 127534
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2130 727 FunFam Cytochrome P450 82C4 34 501 - -
Cam05g2130 727 Gene3D Cytochrome P450 498 572 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 Gene3D Cytochrome P450 31 497 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 SUPERFAMILY Cytochrome P450 42 498 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 SUPERFAMILY Cytochrome P450 500 569 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 Coils Coil 345 365 - -
Cam05g2130 727 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam05g2130 727 Gene3D Cytochrome P450 573 727 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 SUPERFAMILY Cytochrome P450 572 723 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 PANTHER CYTOCHROME P450 82C3-RELATED 493 571 IPR050651 -
Cam05g2130 727 Pfam Cytochrome P450 43 495 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2130 727 Pfam Cytochrome P450 596 724 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2130 Cam-Chr5:29751294 Cam05g2134 Cam-Chr5:29784176 1.60E-189 dispersed
Cam05g2129 Cam-Chr5:29741525 Cam05g2130 Cam-Chr5:29751294 5.10E-177 tandem
Cam05g2130 Cam-Chr5:29751294 Cam05g2131 Cam-Chr5:29764070 2.80E-234 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2130 - - - 0.0