Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2138 ATGGAAATCATTTCACCCCATTTCAATATCACCATACTTGGACTCTTCCTCTTCCTTCTCTCCTCTTTTTTCATTTTGAAAAAGCTAGCCACAGCCTACAAATACAGAGTCCCTCCAGAGGCAGCCGGCGGATGGCCGATCATCGGCCACCTCCGACTGCTACTCGGTCCAAAACTCCCCCACGAAACTTTGGGAGCCATGGCTGACAAATACGGACCAATATTCACCATTCGAGTTGGTATCCACAAAGCTCTGGTTATAAGCAATTGGGAAGTGGCTAAAGAGTGTTATACAACTCTTGATTCACTCATTTCTTCTCGTCCCAAAACTTTAGCTGGCCAATTATTGGGCTACAACTTTGCTGGGTTTGGGTTCAGGCCAAATTACGATTCCTTTTACCGTAACATGAGAAAAATCATAGCCTCGGAGTTGCTTTCGAATCGGCGTTTGGAAAAACAGAGTGAGGTCAGAGTTTGTGAGGTGAAGAAAGCAGTGAAGGAGGTTTATGAATTGTGGATGAAAAAAAGAAAGGATTTGATTTTGGATATGGAAGAATGGATTGGAAATGTGAATTTGAATGTGATTTTGATGATGGTTTGTGGGAAGAGGTTGTTTGGGGAAGATGAGGAGATAATGAGACGGTGCCGGAAAGCGATGAGGGATTTTTTTGATTTGGGTGGGCAGTTTATGGTGGGAGATGCGATTCCATTTGTGAGATGGATGGATTTGGGTGGATATGAGAAGGCTATGAACATTACTTCAAGGGAATTGGATTGTTTTATTAGGGAATGGCTGGAAGAACACCGCCGGAAGAGAGAGTCTGCCCTTGGGGGCGCCGTTGGAGATGGTCAACAGGATTTCATGGATGTGATGCTTTCGATTCTTGAAGGAGGAATGGACCTTGCTGGGTATGATGCTGATACAGTCAACAAAGCTACTTGCATGAGCCTTATTACTGGGGGAAGCGATACAGTGACAGTAACACTAACATGGGCGATCTCGTTTTTACTAAACAACCGAGAGGCATTAAGAAAGATACAAGAGGAGCTAGACATCCATGTTGGAAACAAAAGACTTGTGGATGAATCAGACATAAGCAAATTAGTGTATCTCCAAGCCGTAGTGAAAGAGACGTTAAGGTTGTACCCTGCAGGCCCACTATCGGGGATTCGAGAGTTCAGCCAAGATTGCACTCTAAGAGGGTATCACGTGGCGGCCGGCACACGCCTCATTACTAACCTTTGGAAGATACAGACGGATCCTCGAGTTTGGGCCGAGCCTTTGGAGTTCAAGCCTGAGAGGTTTTTAGGTAGCCAGAAGCAGGTGGATGTTAAGGGCCAGAATTTTGAATTGGGGCCGTTTGGGTATGGAAGAAGGGCTTGTCCTGGGCTTGGGTTTGGAGTTCAAATGACCCAATTGGTGCTGGCCAGTTTCATTCATTCATTTGAAATTGGAACTCCTTCTGATGAACCGGTTGATATGGCGGCTAACTTTGGACTTACCATCCACCGAACCAACCCTCTTCAACTTCTCATCAAGCCTCGTCTTCTAGCAAATGCTTATGCTTGA 1569 45.44 MEIISPHFNITILGLFLFLLSSFFILKKLATAYKYRVPPEAAGGWPIIGHLRLLLGPKLPHETLGAMADKYGPIFTIRVGIHKALVISNWEVAKECYTTLDSLISSRPKTLAGQLLGYNFAGFGFRPNYDSFYRNMRKIIASELLSNRRLEKQSEVRVCEVKKAVKEVYELWMKKRKDLILDMEEWIGNVNLNVILMMVCGKRLFGEDEEIMRRCRKAMRDFFDLGGQFMVGDAIPFVRWMDLGGYEKAMNITSRELDCFIREWLEEHRRKRESALGGAVGDGQQDFMDVMLSILEGGMDLAGYDADTVNKATCMSLITGGSDTVTVTLTWAISFLLNNREALRKIQEELDIHVGNKRLVDESDISKLVYLQAVVKETLRLYPAGPLSGIREFSQDCTLRGYHVAAGTRLITNLWKIQTDPRVWAEPLEFKPERFLGSQKQVDVKGQNFELGPFGYGRRACPGLGFGVQMTQLVLASFIHSFEIGTPSDEPVDMAANFGLTIHRTNPLQLLIKPRLLANAYA 522
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 29824200 29826074 - CaPI482276_05g021380.1 Cam05g2138 127542
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2138 522 CDD CYP82 72 515 - -
Cam05g2138 522 Pfam Cytochrome P450 43 503 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PANTHER CYTOCHROME P450 82C3-RELATED 21 516 IPR050651 -
Cam05g2138 522 Gene3D Cytochrome P450 30 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 FunFam Cytochrome P450 82C4 29 513 - -
Cam05g2138 522 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 SUPERFAMILY Cytochrome P450 44 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam05g2138 522 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2138 522 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2180 Cam-Chr1:34458311 Cam05g2138 Cam-Chr5:29824200 4.00E-137 dispersed
Cam05g2136 Cam-Chr5:29800913 Cam05g2138 Cam-Chr5:29824200 4.00E-124 dispersed
Cam05g2138 Cam-Chr5:29824200 Cam05g2141 Cam-Chr5:29852629 2.80E-212 dispersed
Cam05g2137 Cam-Chr5:29807769 Cam05g2138 Cam-Chr5:29824200 6.20E-127 tandem
Cam05g2138 Cam-Chr5:29824200 Cam05g2139 Cam-Chr5:29829232 1.10E-200 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2138 - - - 0.0