Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2160 ATGAGTCTCTATGCTCTATTAGGACTTGTTCGCTTTTCTGCTCCATCGTCTTTTCTTATTTCCAATTTCAACTCCTTAAATAGAGCATTTATCAACCGAGTCTCCACTCGAACGCAGTTTCCAAGCTACACTACCATGGCTTCATCCATGTCTTCTTCGCCTAACACCAACAAAGACGTCTCAGAAGTAGCACAGCAGCTCCCCAAAATCACTGCGCCGTACGGCTCCTGGAAGTCGCCAATCACTGCTGACGTTGTTACTGGTGCCTCCAAGCGACTTGGTGGTACTGCTGTCGACGGTAATGGACACCTTATCTGGCTCGAATCCCGGCCTACCGAATCCGGGAGAGGAGTGCTTGTTAAGGAATCGGAAAATCCAGGGGATGAGCCTAGTGATATTACTCCAAAGGACTTTTCAGTGCGGAACACGACGCAGGAATACGGCGGTGGTGCGTTCACGGTGGCCGGAGACATCGTTGTCTTTTCGAATTACAAGGACCAAAGACTTTACAAGCAGTCTTTAAATTCAGATTCGCCTCCGGAAGCACTTACTCCCGATTACGGTGGACGATCAGTTAGTTATGCAGATGGGGTGTTCGATTCTCGTTTTAATCGTTTTATTACCGTCCAGGAAGATGGACGTCAAAGTAGCTTGAATCCAATCACCACAATTGTGTCAGTGGAACTTGACGGCAAGGTTATTAATGAACCGAAGGTCTTAGTTGGAGGAAATGATTTCTATGCCTTCCCACGATTGGATCCCAAAGGGGAACGGATTGCATGGATTGAATGGGGTCATCCTAACATGCCTTGGGATAAATCTGAGCTCTGGGTTGGGTACCTTTCTGAGAATGGAGAGGTCTACAAACGAGTCTGTGTTGCTGGTGGTGATCCGAAGCTTGTTGAATCTCCTACTGAACCGAAGTGGTCTGCTCAGGGAGAACTATTCTTTATTACAGATAGACAAAGTGGGTTTTGGAATCTCTATAAATGGTTTGAGGCTGGCAATGAGGTGGCTCCAATATATTCTTTAAACGCTGAATTTTCCCGACCCTTGTGGATTTTTGGCACAAACTCTTATGAATTCTCAAGGACCGGTGTTGGGAAAAACATCATAGTCTGCAGCTACAGACAGCGTGGGCGATCATATCTTGGAGTTCTGGATGAGGCGCAAAGCTCACTATCCTTGCTTGATATCCCATTTACGGATATTGAAAATATTGCTCTGGGAAGTAAATGTATATATGTGGAAGGATCATCAGCACTTCATCCATCATCTATTGCCAAGGTGACCCTGAATGAAAGAACCTTGGAAGTAGTAGGCTTCACTATTATCTGGTCATCTTCGCCGGATATTTTGAAATTTAAGTCGTACTTCAGTCTTCCTGAGTTTATTGAATTTCCAACTGAAGTTCCTGGCCGAAAGGCTTATGCTTACTTTTATCCACCGTCCAATCCTATATACGAGGCTAGTCAGGATGAAAAGCCCCCACTGTTGTTGAAAAGCCATGGAGGTCCAACTGCTGAAACACGTGGAAATTTAAATCCTAGCATTCAATATTGGACTAGTCGAGGCTGGGGTTACGTTGATGTCAATTATGGTGGTAGCACTGGTTATGGGAGAGAGTACCGAGAAAGGCTTTTGGGGCAGTGGGGAATTGTTGATGTCAATGACTGCTGCAGTTGTGCAAGATTTTTGGTGGACTCTGGAAAGGTTGATGGAGAACGATTGTGCATCACAGGGGGCTCTGCTGGGGGATATACCACCTTAGCTGCTCTTGCTTTTAAAGATATATTTAAGGCAGGAGCTTCCTTGTATGGGATAGCTGACTTACGCTTGTTGAGAGCAGATACGCACAAGTTTGAATCTCATTATATTGACAATCTTGTTGGGAATGAAGAAGATTACTTCGAGAGGTCACCAATCAATTTTGTTGACAAATTTTCTTGCCCTATAATCCTATTCCAGGGATTGGAGGACAAAGTCGTACTACCTAATCAAGCTCGTAAGATATATCATGCATTGAAGGATAAGGGCTTGCCAGTTGCTTTGGTTGAGTATGAAGGAGAACAACATGGTTTCCGAAAGACTAGTCGGGGTCATGTAAAAATTCATTTGGATTGTGTTGGCTTTCTTCCAACAAGTCCATTTATATACTCTGATGTCAAATACGGTAGAAGTTTGGAATCACTTCAAACCAAGATGGTTGTCTTTGATGGAACTGTTAAGCATTTGAGCGATCTGGTGCTCTTTTCAAAAGACAGTTGGATGCCCCCATCAGCTGACTACTCCTTCCTACCTCAAAAATTTCGTGCCTACCACCTTCCTCGTGCATCCTATCAAATTTATGTCCTTTTCACACCCACTCTTGCCCTGTTTAGGGACAACAGCCTTCTTCAAGCATATGAAAACTTATGGGTTATTTCTGTGGACATCGCTTGCCTTGAGTTTCACCTGGTTCTTAGGTGGAAGTTTGGGGAACTAAGGAAGTCTTCACGCTACTAG 2505 44.35 MSLYALLGLVRFSAPSSFLISNFNSLNRAFINRVSTRTQFPSYTTMASSMSSSPNTNKDVSEVAQQLPKITAPYGSWKSPITADVVTGASKRLGGTAVDGNGHLIWLESRPTESGRGVLVKESENPGDEPSDITPKDFSVRNTTQEYGGGAFTVAGDIVVFSNYKDQRLYKQSLNSDSPPEALTPDYGGRSVSYADGVFDSRFNRFITVQEDGRQSSLNPITTIVSVELDGKVINEPKVLVGGNDFYAFPRLDPKGERIAWIEWGHPNMPWDKSELWVGYLSENGEVYKRVCVAGGDPKLVESPTEPKWSAQGELFFITDRQSGFWNLYKWFEAGNEVAPIYSLNAEFSRPLWIFGTNSYEFSRTGVGKNIIVCSYRQRGRSYLGVLDEAQSSLSLLDIPFTDIENIALGSKCIYVEGSSALHPSSIAKVTLNERTLEVVGFTIIWSSSPDILKFKSYFSLPEFIEFPTEVPGRKAYAYFYPPSNPIYEASQDEKPPLLLKSHGGPTAETRGNLNPSIQYWTSRGWGYVDVNYGGSTGYGREYRERLLGQWGIVDVNDCCSCARFLVDSGKVDGERLCITGGSAGGYTTLAALAFKDIFKAGASLYGIADLRLLRADTHKFESHYIDNLVGNEEDYFERSPINFVDKFSCPIILFQGLEDKVVLPNQARKIYHALKDKGLPVALVEYEGEQHGFRKTSRGHVKIHLDCVGFLPTSPFIYSDVKYGRSLESLQTKMVVFDGTVKHLSDLVLFSKDSWMPPSADYSFLPQKFRAYHLPRASYQIYVLFTPTLALFRDNSLLQAYENLWVISVDIACLEFHLVLRWKFGELRKSSRY 834
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30011371 30018828 + CaPI482276_05g021600.1 Cam05g2160 127564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2160 834 Gene3D alpha/beta hydrolase 455 705 IPR029058 -
Cam05g2160 834 Pfam Prolyl oligopeptidase family 517 711 IPR001375 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam05g2160 834 SUPERFAMILY DPP6 N-terminal domain-like 149 377 - -
Cam05g2160 834 SUPERFAMILY alpha/beta-Hydrolases 462 698 IPR029058 -
Cam05g2160 834 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 68 698 IPR050585 -
Cam05g2160 834 MobiDBLite consensus disorder prediction 115 139 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2159 Cam-Chr5:29995776 Cam05g2160 Cam-Chr5:30011371 4.10E-289 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2160 - - - 0.0