Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2215 ATGAATAACAGGAATTTCGTCTGTAATCCTATGGTTGCTCTTCCATTATTACCTTCCTCTCACTTGCTGTTTTCGAATAGCGCCACTGATTTCAGGCACAGGGTCTCCATTGTTGTAAAACCCACTTTCCAGGGTTCGTGTAGATGGCGAATCCGAGCCACCGCCGAGAACGGAGTTTCATCGGCGTCGACTTCCCAGATCGACATGGTGAGGAACAGGGAGGGGGTTTTTACCGCCAAACAAAGCAAGGTTGTCGTGCTTTGGGATCTTGATAACAAACCCCCTCGTGGGCCGCCGTACGAGGCGGCTATGGCGCTGAAACGAGTAGCGCAACGCTTCGGACAAGTCGTCGACATGTCGGCTTACGCCAATCGCCACGCCTTTATCCATTTGCCGCAATGGGTTGTTGAAGAACGCCGCGAGCGTCGGCAATTGGATATTCTTGAGCGTAAAGGGTTGTTCACGCCGTCCGAATCGTACGTCTGCGGGGTTTGCGGTCGCAAGTGCAAAACAAACCTAGACCTTAAGAAGCATTTCAAGCAACTTCACGAACGCGAGCGCCAGAAGAAATTGAACAGAATGAGGTCTCTCAAGGGCAAAAAGCGACAGCGTTATAAGGAAAGGTTCGTATCTGGAAACCATAAGTACAATGAAGCAGCGAGGTCTCTGATTACTCCCAAAGTTGGATATGGATTGGCCTCAGAATTGAGACGTGCTGGGGTTTTTGTGAAGACTGTAGAGGATAAGCCTCAGGCAGCTGATTGGGCTTTGAAGAGGCAGATGCAACACTCGATGAGTCGTGGTATTGATTGGATGATTCTTGTTTCCGATGATTCGGATTTCTCAGAGATGTTAAGGAAGGCTAAGGAAGCTAATTTGGGAACTGTGGTGGTGGGAGATCGTGATAGGGCATTGGGTAGGCACGCAGATTTATGGGTTCCATGGATGGGTGTTGAAAATGGGGATATTACAGAGGAGGATTTGGTGCCCAAAAGATGGAGGATGAGAAGAAGAGACGAGGAAATGGATGGAGATGACGATGGTTTTTCAGTTTCTCGTTTCTATGGAGACACTGAAGCTGGTGATTTGGAGAGTGTAGTGGAAGAGCTTGTTTCCGCAAGTACAGAAGAGTTCAATGGCTTTAGAATTTCTGCATTTTCAGAGGGGGAAGATGAAGAAGATGATTGGGTTGAAGAAGATGTGGGATCTGACTATCTGCTAGTGATGAGTGACGAGGAAGATGGGCATTCCTGA 1254 48.25 MNNRNFVCNPMVALPLLPSSHLLFSNSATDFRHRVSIVVKPTFQGSCRWRIRATAENGVSSASTSQIDMVRNREGVFTAKQSKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRERRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKERFVSGNHKYNEAARSLITPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWMILVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENGDITEEDLVPKRWRMRRRDEEMDGDDDGFSVSRFYGDTEAGDLESVVEELVSASTEEFNGFRISAFSEGEDEEDDWVEEDVGSDYLLVMSDEEDGHS 417
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 30449282 30450535 - CaPI482276_05g022150.1 Cam05g2215 127619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2215 417 ProSitePatterns Zinc finger C2H2 type domain signature. 162 183 IPR013087 -
Cam05g2215 417 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 52 396 - -
Cam05g2215 417 Coils Coil 180 200 - -
Cam05g2215 417 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 188 IPR013087 -
Cam05g2215 417 Gene3D - 77 316 - -
Cam05g2215 417 CDD PIN_LabA-like 170 300 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2215 Cam-Chr5:30449282 Cam10g0307 Cam-Chr10:5182386 1.50E-59 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
51993 None None None None Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2215 - - - 0.0