Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam05g2236 | ATGGAACCTCATACAATTCCTTGGCTCTCTCGTTTTCTCATCTCATTCTCTCTTCTCTTCACGCTCATTCTTCTTTCCAAGCTCAGAAAAGTAAACCACAGAAAACTTCCACCAAGCCCACCTTCCCTTCCGGTCATCGGTCACCTTCATCTCCTCAAAGACCCTTTCCACCGAGTGCTGCACCATCTCTCCAACGAATACGGTCCAATTCTATCCCTTTCAATCGGCTCCCGTCCGGTGGTGGTTGTCTCCTCCCCCACCGCTGTCCGTGAGTGCTTCACCAAAAACGACATCGTATTCGCCAATCGCCCTCGCTTACTTTCAGGGAAGTACATCAATTACAACTACACCGCAGTGGGATTCGCCCCCTATGGCCAGCACTGGCGCAACATGCGCCGCATAGCCACGACTGAGCTACTCTCCAACCACCGCCTTAACACGTATCTCAACACTCGAGTGGAAGAACTAAAGTTTTGGGTAAAGAATTTGTACAAATTAATGGTTTGTAGTGGCGATTTTGTTGGGGTGGAAATGAAGTCGAAATTGAAGGAACTATCTTTCAACGTGGTGATGAGGATGATTAGTGGGAAACGGTATTTTGGTGTGGAAGTGGAGAATGTGGAGGAAGCCTTGGAGTTTAGGGAGATTATGCAGGAGCTTCTTGAATTGAGTGGGGCGACGAATGCAGCGGATTTTTTGCCCATTTTGAGAGTGTTTGATTTTCAAGGACTTGAGAAGAGGATGTTGAAAGCGAGTGGGCGAGCTGATGTTTTCCTACAAAAACTCATTGATGAACACAGGGAAAGGAGAGTTTCACGTTGGCCGGAGGACAAACATGGAAAAACCATGATTCAAACTCTGCTCTCCTTGCAAGAATCTCAACCCCATTATTACTCCGATGATATAATCAAGGGTCATCTTCTGACGATGTTGGCTGCGGGTACTGATACAACTTCAGGAACAATAGAATGGGCGATGTCGCTACTTTTGAATCATCCAACGGTGATGAAGAAAGCTTGGATTGAGATAAGAGAAAGGGTTGGGGAGAATCGGATGGTGGAGGAAGGCGATGTGAGTAACCTCAAATATGTGGAAGCCATAATCTACGAGACTCTTCGACTGTTTCCAGCAGCTCCACTGTTGGTCCCACATGAATGTTCTGAAGAATGTAGAATTGAAGGATTTGAGGTAGCCAAAGGAACAATGTTGTTGGTGAATGCATGGGCCATTCATAGGGACTCCAAAGTGTGGGAAGATCCCACCAGCTTCCAACCAGAGAGGTTTCTAAATTGGGAAGGCGTTGAATCCTACAAGTGGATACCTTTTGGAATGGGGAGGAGGGCTTGCCCAGGGGCTGCCCTTGCCCAACGAGTCGTGGGATTAACATTGGCCACTTTGATTCAGTGCTTTGAGTGGGACAAGGTTGATGAACAACAAATAGACTTGTCTGAAGGAAGTGGAATAACTATGCCTAAAGCCAAAGCTTTGGAGGCAATGTGTAAACCTCGTACCTCCATGCTTCATTTACTGGCTCATCTTTGA | 1542 | 46.76 | MEPHTIPWLSRFLISFSLLFTLILLSKLRKVNHRKLPPSPPSLPVIGHLHLLKDPFHRVLHHLSNEYGPILSLSIGSRPVVVVSSPTAVRECFTKNDIVFANRPRLLSGKYINYNYTAVGFAPYGQHWRNMRRIATTELLSNHRLNTYLNTRVEELKFWVKNLYKLMVCSGDFVGVEMKSKLKELSFNVVMRMISGKRYFGVEVENVEEALEFREIMQELLELSGATNAADFLPILRVFDFQGLEKRMLKASGRADVFLQKLIDEHRERRVSRWPEDKHGKTMIQTLLSLQESQPHYYSDDIIKGHLLTMLAAGTDTTSGTIEWAMSLLLNHPTVMKKAWIEIRERVGENRMVEEGDVSNLKYVEAIIYETLRLFPAAPLLVPHECSEECRIEGFEVAKGTMLLVNAWAIHRDSKVWEDPTSFQPERFLNWEGVESYKWIPFGMGRRACPGAALAQRVVGLTLATLIQCFEWDKVDEQQIDLSEGSGITMPKAKALEAMCKPRTSMLHLLAHL | 513 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 30603446 | 30605574 | - | CaPI482276_05g022360.1 | Cam05g2236 | 127640 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam05g2236 | 513 | CDD | CYP81 | 68 | 496 | - | - | |
| Cam05g2236 | 513 | PRINTS | E-class P450 group I signature | 449 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | E-class P450 group I signature | 185 | 203 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | E-class P450 group I signature | 439 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 442 | 451 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam05g2236 | 513 | Pfam | Cytochrome P450 | 37 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | SUPERFAMILY | Cytochrome P450 | 37 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | Gene3D | Cytochrome P450 | 23 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | P450 superfamily signature | 440 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | P450 superfamily signature | 449 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam05g2236 | 513 | PANTHER | CYTOCHROME P450 82C3-RELATED | 18 | 505 | IPR050651 | - | |
| Cam05g2236 | 513 | FunFam | Cytochrome P450 family protein | 28 | 506 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam05g2236 | Cam-Chr5:30603446 | Cam06g0070 | Cam-Chr6:2576684 | 4.10E-147 | dispersed | |
| Cam05g2236 | Cam-Chr5:30603446 | Cam05g2239 | Cam-Chr5:30618998 | 5.90E-138 | proximal | |
| Cam01g1759 | Cam-Chr1:31195853 | Cam05g2236 | Cam-Chr5:30603446 | 8.60E-142 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam05g2236 | K13260 | - | csv:101207002 | 858.981 |