Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2329 ATGGTGGCCGGCAGAGGAATCTCTGGGTGCTCCAACATAAGGAGCATAGTCGTCCACGTCATCATCGGAAGGTGGTTCATGGTGTTCGCTTCGCTCTTAATCATGGCGGCTGCCGGAGCAACGTACATGTTTGGCCTATATTCGAACGATATAAAATCTGTTTTGGGTTATGACCAAACAACATTGAATTTGCTGAGTTTTTTCAAAGATTTGGGTGCAAACGTCGGCGTTTTGTCAGGACTTATTAACGAGGTTACGCCGCCATGGGTGGTTTTGTCCATCGGCGCTGTTTTGAATTTTTTTGGTTACTTCATGATTTGGCTGGCTGTTACTAAGCGGATCTCTACCCCCAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCCAATTCTCAATCTTTTGCTAATACGGGTTCTCTTGTTACCTGTGTCAAAAACTTTCCTGAGAGTCGTGGCGTAGTTCTCGGTATCTTGAAGGGGTACGTCGGACTGAGCGGCGCCATAATCACACAACTCTTCCATGCATTTTATGGCAACGACACCAAATCCTTAATTCTCCTCATCGGATGGCTCCCGGCGGCAATTTCCTTCGCATTTTTACGAACAATTCGTATTATGAAAGTTATCCGACAGCCAAACGAGCTTAAAGTCTTCTACAATTTCCTTTACATTTCTCTTGGCCTCGCCGGATTCCTAATGCTAATGATCATCGTAGAGAGCAAAACAGAGTTCACTCAAAGCGAATACGGTGGCAGCGCCGCTGTCGTCCTTCTCCTCCTCTTCCTCCCACTCGCCGTCGTCATCATTGAAGAATACAATCTCTGGAAACTCAAAACCGTCCTCATTAAATCCCCAAATCCCTCTGTTCAAATCGTAACAGAGAAACTCCCAAAAACCGAGCAACTCCATAAGACAGAGCATCCAAAACAACAACAAAAAGAACCATCTTGTTGGACAACAATTTTCAACCCACCAGCGCGCGGCGAGGATTTCACAATTCTCCAAGCTCTCTTCAGTGTCGACATGCTGATTCTATTCCTCTCTGCAATTTGCGGCGTCGGCGGAACATTAACGGCAATAGACAATTTGGGTCAAATCGGAATGTCTTTGGGGTACCCAAAAAGAAGCATTAGCACATTTGTAACATTAGTCAGCATTTGGAATTACCTCGGCCGAGTTGCCTCTGGTTTCATCTCAGAAATAGTTTTGACAAAATACAAATTCCCTCGTCCTCTAATGCTCTCTCTGACCCTTCTTTTTTCCTGCATTGGCCATTTGATGATCGCATTTGATGTCCCAAATGGGCTTTATGTGGCTTCCATCGTAATTGGATTCTGCTTTGGAGCACAGTGGCCATTGATTTTCGCCATAATTTCAGAGCTTTTTGGGTTGAAATATTACTCCACACTATACAACTTTGGGGCAGTGGCAAGCCCAAAGTTCCGAGATGAAGCTGAAACAGAGGTGGCCGGAAATGGATGTTTGGCGGCGGCCACAGCAACAGAAGAGACAAGAAAATGA 1524 45.08 MVAGRGISGCSNIRSIVVHVIIGRWFMVFASLLIMAAAGATYMFGLYSNDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAVTKRISTPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGNDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLGLAGFLMLMIIVESKTEFTQSEYGGSAAVVLLLLFLPLAVVIIEEYNLWKLKTVLIKSPNPSVQIVTEKLPKTEQLHKTEHPKQQQKEPSCWTTIFNPPARGEDFTILQALFSVDMLILFLSAICGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFISEIVLTKYKFPRPLMLSLTLLFSCIGHLMIAFDVPNGLYVASIVIGFCFGAQWPLIFAIISELFGLKYYSTLYNFGAVASPKFRDEAETEVAGNGCLAAATATEETRK 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31342122 31344389 + CaPI482276_05g023290.1 Cam05g2329 127733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2329 507 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 24 480 - GO:0016020(PANTHER)
Cam05g2329 507 Pfam Nodulin-like 24 269 IPR010658 -
Cam05g2329 507 CDD MFS_Mch1p_like 23 480 - -
Cam05g2329 507 Gene3D MFS general substrate transporter like domains 219 483 IPR036259 -
Cam05g2329 507 SUPERFAMILY MFS general substrate transporter 23 473 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0265 Cam-Chr3:3715381 Cam05g2329 Cam-Chr5:31342122 8.80E-121 dispersed
Cam05g2329 Cam-Chr5:31342122 Cam05g2331 Cam-Chr5:31363743 3.90E-174 dispersed
Cam05g2329 Cam-Chr5:31342122 Cam05g2330 Cam-Chr5:31353766 8.50E-230 tandem
Cam10g1964 Cam-Chr10:33579453 Cam05g2329 Cam-Chr5:31342122 5.60E-144 wgd
Cam05g2329 Cam-Chr5:31342122 Cam08g1228 Cam-Chr8:18654438 3.70E-185 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2329 - - - 0.0