Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2330 ATGGTGTTCGCTTCACTCCTAATCATGGTGACAGCCGGAACATTGTTCATGTACAGCATATATTCGAACGACATAAAATTTGTTTTGGGTTACGACCAAACGACATTGAATTTGCTGAGCTTTTCCAAGGATTTGGGCGCAAACGTGGGCATTTTGTCTGGGCTTATTAACGAGGTTACACCACCGTGGGTGGTTCTATCCATCGGTGCCGTTTTGAATTTCTTTGGTTACTTTATGATTTGGTTGGCTATTACGAAACGAATCTCTAGCCCCAAAGTTTGGCAAATGTGTCTTTATATTTGTATTGGAGCCAATTCTCAATCTTTTGCTAATACAAGATCTCTTGTTACTTGTGTCAAGAACTTCCCCGAGAGCCGTGGTGTTGTTCTTGGTATCTTGAAGGGATACGTCGGACTGAGCGGCGCCATAATCACACAACTCTTCCATGCATTTTACGGCAACGACACCAAATCCTTAATTCTCCTCATCGGATGGCTCCCGGCGGCAATTTCCTTCGCATTTTTACGAACAATTCGTATTATGAAAGTTATCCGACAGCCAAACGAGCTTAAAGTCTTCTACAATTTCCTTTACATTTCTCTTGGCCTCGCCGGATTCCTAATGCTAATGATCATCGTAGAGAGCAAAACAGAGTTCACTCAAAGCGAATACGGTGGCAGCGCCGCTGTCGTCCTTCTCCTCCTCTTCCTCCCACTCGCCGTCGTCATCATTGAAGAATACAATCTCTGGAAACTCAAAACCGTCCTCATTAAATCCCCAAATCCCTCTGTTCAAATCGTAACAGAGAAACTCCCAAAAACCGAGCAACTCCATAAGACAGAGCATCCAAAACAACAACAAAAAGAACCATCTTGTTGGACAACAATTTTCAACCCACCAGCGCGCGGCGAGGATTTCACAATTCTCCAAGCTCTCTCCAGTGTCGACATGCTGATTCTATTCCTCTCTGCAATTTGCGGCGTCGGCGGAACATTAACGGCAATAGACAATTTGGGTCAAATCGGAATGTCTTTGGGGTACCCAAAAAGAAGCATTAGCACATTTGTAACATTAGTCAGCATTTGGAATTACCTCGGCCGAGTTGCCTCTGGTTTCATCTCAGAAATAGTTTTGACAAAATACAAATTCCCTCGTCCTCTAATGCTCTCTCTGACCCTTCTTTTTTCCTGCATTGGCCATTTGATGATCGCATTTGATGTCCCAAATGGGCTTTATGTGGCTTCCGTCGTAATCGGATTTTGTTTTGGAGCATAG 1275 43.92 MVFASLLIMVTAGTLFMYSIYSNDIKFVLGYDQTTLNLLSFSKDLGANVGILSGLINEVTPPWVVLSIGAVLNFFGYFMIWLAITKRISSPKVWQMCLYICIGANSQSFANTRSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLFHAFYGNDTKSLILLIGWLPAAISFAFLRTIRIMKVIRQPNELKVFYNFLYISLGLAGFLMLMIIVESKTEFTQSEYGGSAAVVLLLLFLPLAVVIIEEYNLWKLKTVLIKSPNPSVQIVTEKLPKTEQLHKTEHPKQQQKEPSCWTTIFNPPARGEDFTILQALSSVDMLILFLSAICGVGGTLTAIDNLGQIGMSLGYPKRSISTFVTLVSIWNYLGRVASGFISEIVLTKYKFPRPLMLSLTLLFSCIGHLMIAFDVPNGLYVASVVIGFCFGA 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31353766 31355679 + CaPI482276_05g023300.1 Cam05g2330 127734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2330 424 Pfam Nodulin-like 1 243 IPR010658 -
Cam05g2330 424 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 424 - GO:0016020(PANTHER)
Cam05g2330 424 SUPERFAMILY MFS general substrate transporter 2 423 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2330 Cam-Chr5:31353766 Cam08g1228 Cam-Chr8:18654438 1.60E-160 dispersed
Cam05g2329 Cam-Chr5:31342122 Cam05g2330 Cam-Chr5:31353766 8.50E-230 tandem
Cam05g2330 Cam-Chr5:31353766 Cam05g2331 Cam-Chr5:31363743 1.20E-147 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2330 - - - 0.0