Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2331 ATGGAGGGATTGGGCATGAAATCCTTTACACTAAAACTAATCAAAGGGTCATGGTTCATGATGTTTGGGTCGTTCCTAATCATGTCGATGGCAGGCATCCCCTACATGTTCGGCTTGTATTCCAGCACCATAAAATCCGTCTTAGGGTACGACCAAACAACCCTAAACTTCATAAGTTTCTTCAAAGACGTCGGTACAACGGTCGGCGTCGTAGCTGGGTTAATCAACGAAGTAACCCCGCCATGGTCCATCCTAGCCATGGGAGCTCTCCTCAACTTCTTCGGCTACTTCATGATCTGGTTATCCGTCTCCCAGAAAATCCCCACTCACGTCTGGTTAATGTGTCTCTACATCTGTGTCGGCGCCAACGCAACGACGTTCGCCAACACGGGAGCGTTAGTTACGTGCGTAAAGAACTACCCGCAACGGCGTGGCGTCGTGATCGGGATTTTGAAAGGGTATATGGGATTGAGTGGGGCAATTGTGACGCAATTGTATCATGCTATATATGGGAAAGATGAGAAGTCGTTGATATTGTTGTTGGGGTGGTTGCCTGCGGTGGTGTCGTTCGTGTTTTTGCCGACGGTACGGCGGATGAAGGTGGAGCATGAGGAGGATGAGTTGAAGGTTTTTTATAGGTTTTTGTATATATCGTTGGGATTGGCAGGGTTTTTGATGATGATGATAATTTTGCAACAAAAGTTTAGTTTTGATAGAGGGGAATATGGAGGGAGTGCGGCGGTGGTTACTATTTTGTTGCTTTTTCCTATCGTCGTGGTTGTTGCTCAAGAGTTTAAGGCGTGGCGGCGGTTGAATAAGCCGGCGGTTCTTGAAAATGGCCTTTCTCCCTTGCCGATGTCACCACCATTGAAGAACACAACACCAATGTCACTCCTCCCGAAGAAACCAAAACCCCAACAACAACCCATCAAAGTCGAGTGGTGGAAAAACGTATTTAATCCCCCACCAAGAGGAGACGATTGGACAATCCTCCAAGCTCTGTTCAGCTTCGACATGTTCCTCCTCTTCCTTGCCACCGCCTGCGGCGTCGGCGGCACCCTCACCGCCATCGATAACCTCGGCCAAATCGGTCAATCCCAAGATTACCCCAAAAAAAGCATCAGCACATTCGTTTCCCTCGTCAGCATCTGGAATTACCTCGGCCGAGTCATGGCCGGATTCCTCTCCGAACATTTACTCATCAAATACAAATTCCCCCGTCCTTTAATGCTTACGATCGTTCTCCTTCTTTCCTGCATTGCCCATCTTCTAATCGCCTTCAATCCCGCCGGCGGCCTTTACATCGCCTCTGTTTTGACCGGATTCTGTTACGGCGCTCAATGGCCTCTGCTTTTCGCCATTGTTTCAGAGATTTTTGGGCTGAAATATTACGCGACTTTGTATAATTTCGGGTCGGTGGCTAGCCCTGTAGGGCTTTATGTGTTGAATGTGAATGTGGCTGGGTATTTGTATGATAAGGAAGCGAAGAAGCAGCTGGCGGTGGCGGGGAGGATTAGGAAAACAGGGGAGGAGTTGATTTGTAATGGGACGGTGTGTTTTAAGCTTTCTTTTGTGATTATTACGGCGGTGAGTTTGTTTGGGGCTTTGGTTTCCTTGGTTTTAGTGTTGAGGACCAAGAAGTTTTATAAGAGTGATATTTATAGGAAGTTTAGAGAGGCAGAGGAGGCCGCCGCCGCGGCGGAGAAAGAGGAGGAGGATGGTGGGGATGGAGTTAGAAACGGCGGCGGTTTGGTGGAGGAGTCGAAACAGGGGCTTAGGCAATGA 1785 48.63 MEGLGMKSFTLKLIKGSWFMMFGSFLIMSMAGIPYMFGLYSSTIKSVLGYDQTTLNFISFFKDVGTTVGVVAGLINEVTPPWSILAMGALLNFFGYFMIWLSVSQKIPTHVWLMCLYICVGANATTFANTGALVTCVKNYPQRRGVVIGILKGYMGLSGAIVTQLYHAIYGKDEKSLILLLGWLPAVVSFVFLPTVRRMKVEHEEDELKVFYRFLYISLGLAGFLMMMIILQQKFSFDRGEYGGSAAVVTILLLFPIVVVVAQEFKAWRRLNKPAVLENGLSPLPMSPPLKNTTPMSLLPKKPKPQQQPIKVEWWKNVFNPPPRGDDWTILQALFSFDMFLLFLATACGVGGTLTAIDNLGQIGQSQDYPKKSISTFVSLVSIWNYLGRVMAGFLSEHLLIKYKFPRPLMLTIVLLLSCIAHLLIAFNPAGGLYIASVLTGFCYGAQWPLLFAIVSEIFGLKYYATLYNFGSVASPVGLYVLNVNVAGYLYDKEAKKQLAVAGRIRKTGEELICNGTVCFKLSFVIITAVSLFGALVSLVLVLRTKKFYKSDIYRKFREAEEAAAAAEKEEEDGGDGVRNGGGLVEESKQGLRQ 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31363743 31365686 + CaPI482276_05g023310.1 Cam05g2331 127735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2331 594 SUPERFAMILY MFS general substrate transporter 12 203 IPR036259 -
Cam05g2331 594 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 17 558 - GO:0016020(PANTHER)
Cam05g2331 594 Pfam Nodulin-like 18 261 IPR010658 -
Cam05g2331 594 CDD MFS_Mch1p_like 18 535 - -
Cam05g2331 594 Gene3D MFS general substrate transporter like domains 328 550 IPR036259 -
Cam05g2331 594 SUPERFAMILY MFS general substrate transporter 247 549 IPR036259 -
Cam05g2331 594 Pfam Major Facilitator Superfamily 341 547 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Cam05g2331 594 Coils Coil 550 570 - -
Cam05g2331 594 MobiDBLite consensus disorder prediction 566 594 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2329 Cam-Chr5:31342122 Cam05g2331 Cam-Chr5:31363743 3.90E-174 dispersed
Cam05g2331 Cam-Chr5:31363743 Cam08g1228 Cam-Chr8:18654438 2.30E-218 dispersed
Cam05g2330 Cam-Chr5:31353766 Cam05g2331 Cam-Chr5:31363743 1.20E-147 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2331 - - - 0.0