Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2347 ATGAACTGTCTTCAGAACCTTTCAATATCATCTTCTTTCCCGTTCCGGAGCTTCAAATGCCGACAGAGACAGCCTGAATTCCAGCTCTGTAACCTGGTGATAAGGAACTTTACCGATCTACATCGACGTTCTATCGTGAAGGCAGTGTCTGGCTCTACATCAAGTGCTGAAATGAGTGGCGCAGAGGTGGATGATGCCGAGGAAAAGGAGGAAAAATCTGAAATATACAGCCATAACATGACAGAAGCTATGGGTGCTGTATTGACGTATAGACATGAGCTGGGAATGAACTACAACTTTATTCGTCCAGATTTAATTGTAGGATCATGCCTACAGACTCCAGAGGATGTTGACAAGCTCCGCAGCATTGGAGTAAAAACAGTTTTCTGCTTGCAGCAAGATCCAGATTTGGAATATTTTGGGGTTGACATTGGTGCTATAATAGCATATACAAAGACATTTGATGATATCGAACATTTACGAGCTCAAATAAGGGATTTTGATGCATTTGACCTACGGCTAAGATTACCAGCTGTTGTAAGCAAATTGCATAAAGCCATAAACCGAAACGGTGGAGTGGCTTACATACATTGCACTGCTGGACTTGGAAGGGCTCCTGCTGTTGCGATGGCGTATATGTTCTGGGTTCAAGGCTACAAACTCAATGAGGCTCTAGAATTACTTCTGAGCAAACGCTCATGCTTCCCAAAAATAGATGCTATTAAAAATGCAACAGCCGATATTCTTTTAGGATTTAGAAAGAAGCCTGTCACTTTATCATGGGAAGATGAGCAATGCTCAACTGTAGAAGTATCTGGACTTGATATTGGATGGGGCCAGAGGATTCCATTAAAATTCGACGAGGCACGAGGTGCATGGATTCTCAATAGGGAACTGCCGGAAGGACGATATGAATACAAATACATTATCGATGGTATATGGACGTGCAACGAAAACGAGCCCGTCACTCCACCCAACAAAGATGGCCACGTCAACAATTTCATTGAAGTTGTTGAAGATGAGGATCCGGGTAGTGATAGAGCAATTCTTCGGGGAAGGTTAACCGGAGATGAACCAGAACTCACAGCCGAAGAAAGAAGCAAAATAAGAGCATTTCTTGAAGCTTGCCCAGATGAAAATTGA 1143 42.96 MNCLQNLSISSSFPFRSFKCRQRQPEFQLCNLVIRNFTDLHRRSIVKAVSGSTSSAEMSGAEVDDAEEKEEKSEIYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRSIGVKTVFCLQQDPDLEYFGVDIGAIIAYTKTFDDIEHLRAQIRDFDAFDLRLRLPAVVSKLHKAINRNGGVAYIHCTAGLGRAPAVAMAYMFWVQGYKLNEALELLLSKRSCFPKIDAIKNATADILLGFRKKPVTLSWEDEQCSTVEVSGLDIGWGQRIPLKFDEARGAWILNRELPEGRYEYKYIIDGIWTCNENEPVTPPNKDGHVNNFIEVVEDEDPGSDRAILRGRLTGDEPELTAEERSKIRAFLEACPDEN 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31535491 31542149 - CaPI482276_05g023470.1 Cam05g2347 127751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2347 380 SUPERFAMILY E set domains 255 337 IPR014756 -
Cam05g2347 380 CDD DSP_laforin-like 96 243 IPR045204 GO:0019203(InterPro)
Cam05g2347 380 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 3 379 IPR052832 GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER)
Cam05g2347 380 Gene3D Protein tyrosine phosphatase superfamily 90 371 IPR029021 -
Cam05g2347 380 CDD E_set_AMPKbeta_like_N 256 337 - -
Cam05g2347 380 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 174 232 IPR000387 GO:0016311(InterPro)
Cam05g2347 380 Gene3D Immunoglobulins 252 344 IPR013783 -
Cam05g2347 380 ProSiteProfiles Dual specificity protein phosphatase domain profile. 97 254 IPR020422 GO:0006470(InterPro)
Cam05g2347 380 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 94 238 IPR029021 -
Cam05g2347 380 Pfam Glycogen recognition site of AMP-activated protein kinase 256 340 IPR032640 -
Cam05g2347 380 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 252 342 - -
Cam05g2347 380 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 90 271 - -
Cam05g2347 380 Pfam Dual specificity phosphatase, catalytic domain 153 235 IPR000340 GO:0016311(InterPro)
Cam05g2347 380 SMART dsp_5 97 243 IPR020422 GO:0006470(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2347 Cam-Chr5:31535491 Cam07g0497 Cam-Chr7:6993582 8.80E-38 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2347 - - - 0.0