Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2361 ATGGCTTCTTTCTCCTCTTCATCCACTTTCTTCCTCATTGCCTTTTTCCTCTCCGGTTTAATCTTCTTCCTCACCAGAACACTCATAAAAAACCGCCCCAAACTCCCTCCTGGACCGCTCGGTTGGCCCATCGTCGGCAACCTCTTCCAAGTCGCCCGGTCCAAAAAACCCTTCTTCGAATACATCGAAGATCAACGCCGAATTTACGGCCCAATTTTTACCCTCAAAATGGGCACTACAACAATGGTTGTATTAAGCGATTCGAATCTCGTTCACGAAGCTCTAATTAAAACGGGGGCAGTTTTTGCTGACCGGCCCAGAGAAAATCCTACCCGGATTATATTCAGTAGCAATAAATTTTCAGTCAATTCGGCGGTTTACGGCCCTATATGGCGGACCCTCCGCCGCAATATGGTGGAAAATATGCTCAGCTCCGGCAAGGTAAAGGAGTTTCATGGCGTGAGAGAAAAAGCAATGGAAAAATTCGTGAAGCGGTTACGAGATGAAGCAAAGGCTAATAACGGCGTCGTTTTGGTACTTAAAAACGCGCGTTTTGCGGTGTTTTGGATTCTGTTGACAATGTGTTTCGGATTCGAGATGGAAGAAGAAACGGTTGAGAAAATGGATGAGATTCTCAAATCCGTTTTGATCACACTCGAACCAAGAATCGACGATTATTTCCCGATTTTAACTCCTTTTTTCTCTAGGGAAAAAAATCGAGCGAATCTCGTTCGGAAAAAACAAGTCGAATTCGTCATTGAGTTAATTAATCGGCGGCGGCGGGCGCTGGAGAATCCGGCGTCCGACGGCACTGCGACGTCATTTTCGTACCTAGACACGCTTTTCGATTTGAAAATCGACGGCCGCGGTGGCGGGGGGAAATCGTCGGCAACGGACGAGGAATTGGTGACACTTTGTTCGGAGTTTTTGAACGGCGGGACGGACACGACGGCGACGGTGATAGAGTGGGGGATGGCGGAATTGATAGGGAATCCGGAAGTTCAGAGGAAAGTTGTGGAAGAAATTAAAGAGACGGTTGGTGAGAGAAAAGTAGAGGAAAAAGACATAGAGAAAATGGTATATTTACAAGCGGTTGTGAAAGAAGTGCTGCGGAAACATCCTCCGACGTTCTTTGTTTTGACGCACTCCGTGACGGAGCCGGCGAAATTGGCAGGATACGACATCCCGAAAGACACGAACGTGGAATTCTTCCTACCCGCCATCGGAAGGGATCCGAAGCTGTGGGAGAATCCAGAGAAATTCGAACCGGAAAGATTTTACTCCGGCAAGGAAGAAGCCGACATTACCGGCGTCACTGGCGTCAGAATGATGCCGTTCGGCGTAGGGCGGCGTATCTGCCCGGGCTTGGGATTGGCCACCGTCCACATTCATTTAATGCTTGCCAGAATGCTGCAGGAATTTGAATGGACCGCCTATCCGCCGTCCAGCTCCGTCGACTTTTCATGGAAGATGGAGTTCACCGTCGTCATGAAGAATCCTCTTAGAGCTATTGTCAAATCAAGGGTTTAA 1530 48.43 MASFSSSSTFFLIAFFLSGLIFFLTRTLIKNRPKLPPGPLGWPIVGNLFQVARSKKPFFEYIEDQRRIYGPIFTLKMGTTTMVVLSDSNLVHEALIKTGAVFADRPRENPTRIIFSSNKFSVNSAVYGPIWRTLRRNMVENMLSSGKVKEFHGVREKAMEKFVKRLRDEAKANNGVVLVLKNARFAVFWILLTMCFGFEMEEETVEKMDEILKSVLITLEPRIDDYFPILTPFFSREKNRANLVRKKQVEFVIELINRRRRALENPASDGTATSFSYLDTLFDLKIDGRGGGGKSSATDEELVTLCSEFLNGGTDTTATVIEWGMAELIGNPEVQRKVVEEIKETVGERKVEEKDIEKMVYLQAVVKEVLRKHPPTFFVLTHSVTEPAKLAGYDIPKDTNVEFFLPAIGRDPKLWENPEKFEPERFYSGKEEADITGVTGVRMMPFGVGRRICPGLGLATVHIHLMLARMLQEFEWTAYPPSSSVDFSWKMEFTVVMKNPLRAIVKSRV 509
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 31722957 31725303 + CaPI482276_05g023610.1 Cam05g2361 127765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2361 509 CDD CYP77_89 68 502 - -
Cam05g2361 509 FunFam Cytochrome P450 family protein 29 509 - -
Cam05g2361 509 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 20 506 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Cam05g2361 509 SUPERFAMILY Cytochrome P450 36 508 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam05g2361 509 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 Gene3D Cytochrome P450 28 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g2361 509 Pfam Cytochrome P450 36 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2266 Cam-Chr1:34977793 Cam05g2361 Cam-Chr5:31722957 3.30E-120 dispersed
Cam05g2361 Cam-Chr5:31722957 Cam09g1743 Cam-Chr9:31295069 2.70E-98 dispersed
Cam01g0073 Cam-Chr1:1035936 Cam05g2361 Cam-Chr5:31722957 7.10E-91 transposed
Cam09g1502 Cam-Chr9:25150270 Cam05g2361 Cam-Chr5:31722957 2.00E-58 transposed
Cam05g2361 Cam-Chr5:31722957 Cam08g1259 Cam-Chr8:18922612 7.30E-205 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2361 K21995 - csv:101217068 880.552