Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2445 ATGGCAAAATTTCCTTCAATTTCCCTGTTTTTTCTCCTCTGCAACTTATGCCTTTCCAGGGCTTCTTTGAATGAAGAGGGCAATGCCCTTTTATCATTCAAACAATCCATTACTGAAGACCCAGAGGGGTGTTTCAGCAACTGGAATTCTTCCGATGAAACCCCATGTGGTTGGAATGGAGTTACATGCAAGGATCTAAGAGTTGTTTCTCTTAGTATTCCTAAGAAGAAACTTAATGGGGTTATTCCTTCTTCTCTGGGGTTTCTGTCTGAGCTTCGTCATGTGAATCTCAGGAGTAATAAGCTCCATGGAACCTTGCCAATGGAGCTTTTTCAAGCTAATGGAATTCAAAGTTTGGTGCTTTATGGAAATTCCTTCACTGGGTCTCTTCCAAATGAGATTGGTAAGCTAAAAAACCTTCAAATCTTGGATTTGTCTCAGAATTTCTTTAATGGGTCCTTGCCTGTTTCCTTAATGCAATGCACAAGGTTGAGAGTTCTTGATCTTGGTCAGAACAATTTTTCCAATTCTCTGCCTACTGGGTTTGGTTCCAGTTTGAATTTCTTGGAAACATTGGATCTTTCTTACAATAATTTTAATGGTTCAATTCCAATGGATATCGGTAATTTGTCTAGCTTACAAGGCACTGTTGATTTCTCACATAATTTGTTTTCTGGCTCTATCCCAGCCAGCCTGGGAAACCTTCCTGAAAAAGTTTATATTGATCTTACTTATAATAATTTGAGTGGTTCAATACCCCAAAATGGTGCTCTTATGAACAGAGGGCCAACTGCTTTTATTGGGAATCCTGGCCTTTGTGGGCCGCCGTTGAAGAACCCATGTTCTTCTGAAACTCCGGGCGCAAGTTCCCCGTCCTCGTTCCCATTTTTCCCAGACAATTATCCACCTGGGAGTTCTGAGGGTAATGGTAATAAGTATGACAAAGGAGCGCTGAGTAAGAGCACTTTGGTTGCAATAATCATCGGTGACATTGTCGGTATTTGCCTGATCGGGTTGCTGTTTTCATATTGCTATTCGAGGTTTTGCACTCATAGAAATGGGAAGAAGGCAGACCAATCTAATTATGGATTTGAGAAGGGTGGAAAAGGAAGAAAAGATTGTCTCTGCTTTCAAAAGGGTGAATCCGAGAACGTTTCGGAGCATATCGAGCAGTTTGATTTGGTACCTCTGGATTCACAAGTGACGTTTGATCTCGACGAACTTCTCAAGGCATCGGCATTTGTTTTGGGAAAAAGTGGTATCGGAATCGTGTATAAAGTTGTGCTTGAAGATGGACTCACTTTAGCTGTGAGAAGATTGGGTGAAGGAGGTTCTCAAAGATTAAAAGAATTTCAAACTGAAGTTGAAGCAATTGGGAAGTTGAGGCATCCGAATGTAGTTAGCCTTAGAGCATATTATTGGTCTGTTGATGAGAAACTGCTTATTTATGATTACATACCAAATGGGAACCTTGCATCTGCTATTCATGGAAAGCCCGGAACAACATCGTTTACACCGTTAGCGTGGTCTGTTCGGTTTAAAATCATGAAAGGCATTGCGAAAGGGTTGGTTTACTTGCACGAGTTTAGCCCGAAAAAGTATGTTCATGGTAATTTGAAAACAAACAACATACTTCTTGGACACGACATGACACCGCATATTTCTAATTTTGGGCTTGCCCGCCTTGTTAACATTGCTGGAGGATCGCCAACTGTGCGATCGAGTCATATAACAGAGGAAAAACCACAAGAGAAACAACTAAAGTCTGCCACCTCTGAAGCTAGTACATTCAGTTCTAGCATGAGTACTTACTACCAAGCACCAGAAGCGTTCAAAGTCGTGAAGCCATCACAGAAATGGGACGTTTACTCGTATGGTGTGATATTACTTGAAATGATCACTGGAAGGTTGCCTATAGTTCAGGTGGGAGCGTCGGAAATGGATCTTGTTCAATGGATTCAACTCTGCATTGAGGAAAAGAAGCCGCTTTCAGATGTGATAGACCCATCTTTGGCTCCGGACGACGATGCAGACGAGGAGATTATTGCGGTTTTGAAGATAGCATTAGCTTGTGTTCAAAATAGTCCAGAAAGAAGACCTGCAATGAGACATGTTTGTGATGGATTGAGCAGGTTGGGTGTCACTCCAAACTGA 2154 41.69 MAKFPSISLFFLLCNLCLSRASLNEEGNALLSFKQSITEDPEGCFSNWNSSDETPCGWNGVTCKDLRVVSLSIPKKKLNGVIPSSLGFLSELRHVNLRSNKLHGTLPMELFQANGIQSLVLYGNSFTGSLPNEIGKLKNLQILDLSQNFFNGSLPVSLMQCTRLRVLDLGQNNFSNSLPTGFGSSLNFLETLDLSYNNFNGSIPMDIGNLSSLQGTVDFSHNLFSGSIPASLGNLPEKVYIDLTYNNLSGSIPQNGALMNRGPTAFIGNPGLCGPPLKNPCSSETPGASSPSSFPFFPDNYPPGSSEGNGNKYDKGALSKSTLVAIIIGDIVGICLIGLLFSYCYSRFCTHRNGKKADQSNYGFEKGGKGRKDCLCFQKGESENVSEHIEQFDLVPLDSQVTFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRLKEFQTEVEAIGKLRHPNVVSLRAYYWSVDEKLLIYDYIPNGNLASAIHGKPGTTSFTPLAWSVRFKIMKGIAKGLVYLHEFSPKKYVHGNLKTNNILLGHDMTPHISNFGLARLVNIAGGSPTVRSSHITEEKPQEKQLKSATSEASTFSSSMSTYYQAPEAFKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGASEMDLVQWIQLCIEEKKPLSDVIDPSLAPDDDADEEIIAVLKIALACVQNSPERRPAMRHVCDGLSRLGVTPN 717
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32390926 32393156 - CaPI482276_05g024450.1 Cam05g2445 127849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2445 717 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Cam05g2445 717 MobiDBLite consensus disorder prediction 278 308 - -
Cam05g2445 717 FunFam Leucine-rich repeat protein kinase family protein 486 715 - -
Cam05g2445 717 MobiDBLite consensus disorder prediction 573 593 - -
Cam05g2445 717 CDD STKc_IRAK 416 712 - -
Cam05g2445 717 Gene3D Ribonuclease Inhibitor 180 282 IPR032675 -
Cam05g2445 717 Gene3D Ribonuclease Inhibitor 22 179 IPR032675 -
Cam05g2445 717 Pfam Leucine Rich Repeat 116 137 IPR001611 GO:0005515(InterPro)
Cam05g2445 717 Pfam Leucine Rich Repeat 217 235 IPR001611 GO:0005515(InterPro)
Cam05g2445 717 Pfam Leucine Rich Repeat 189 210 IPR001611 GO:0005515(InterPro)
Cam05g2445 717 Pfam Leucine Rich Repeat 139 161 IPR001611 GO:0005515(InterPro)
Cam05g2445 717 Pfam Leucine Rich Repeat 163 184 IPR001611 GO:0005515(InterPro)
Cam05g2445 717 Gene3D Phosphorylase Kinase; domain 1 378 485 - -
Cam05g2445 717 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 184 - -
Cam05g2445 717 Gene3D Transferase(Phosphotransferase) domain 1 486 715 - -
Cam05g2445 717 ProSiteProfiles Protein kinase domain profile. 410 712 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g2445 717 FunFam Leucine-rich repeat receptor-like protein kinase 188 283 - -
Cam05g2445 717 SUPERFAMILY Protein kinase-like (PK-like) 415 707 IPR011009 -
Cam05g2445 717 PANTHER OS05G0588300 PROTEIN 161 712 IPR050994 -
Cam05g2445 717 FunFam Leucine-rich repeat receptor-like protein kinase 393 485 - -
Cam05g2445 717 Pfam Protein kinase domain 416 706 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g2445 717 SUPERFAMILY L domain-like 25 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2445 Cam-Chr5:32390926 Cam10g1909 Cam-Chr10:33160136 4.30E-62 dispersed
Cam04g0053 Cam-Chr4:1557467 Cam05g2445 Cam-Chr5:32390926 3.60E-76 transposed
Cam05g1190 Cam-Chr5:11186074 Cam05g2445 Cam-Chr5:32390926 1.60E-70 transposed
Cam11g1410 Cam-Chr11:26771885 Cam05g2445 Cam-Chr5:32390926 2.50E-110 transposed
Cam01g0603 Cam-Chr1:6519930 Cam05g2445 Cam-Chr5:32390926 1.70E-212 wgd
Cam11g0771 Cam-Chr11:9634437 Cam05g2445 Cam-Chr5:32390926 3.20E-130 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85214 PF00069 Pkinase 2.30E-29 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2445 - - - 0.0