Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2510 ATGTGCTCTTCTTCTTCTTTTGCATCTACCTTCTCTTTATTCCTTACGAAGTCGCCGTCGATTTCCCGACGACGGAATGTTATTTATCCCAACTCCCATCTATTCCTCGGCCATCTCAGGCCCACTAGCTCTACATTTCGTATTACTGCCTCAATTACTGAAAGAGACCTCGAGCTCTCGTCTTGGTTTAATCCTGACCAACCCAATAACGACGACGCCTACGGTGGCTGGATATTTCTCAACTCTCCAACCAGCGTCGCAAAAACCGAGAAACGAGGGCTGCCTCGTTTCGTAATAGGGGTGGTTGGGACCTCGCTTGTTGTTTTGTTCGCCGTTATTGCTCAGATTTCACTATCAAGAAGAGGGTTTAAGTTTCAGTGGCGTACTCCCTTGAGATCATTAGAAGGGGTATGTAGTCACACCGAAAATGTAAGTGATCAAGGAAAAACAGTGGAGGTTAGTTTAACCAATGACGACCTACCGACTGAATCTGGTGCTGAGTCTATACCTGTTTCTAAGATTAATGACGCTGTTACTTCAGTGCATTGTGTGATGCAAATTCCCATTCCCTTGCCTGATAAGGAGGTTTCTTGGATGGAATGGAAGAATGGAAGAATGAAACTGAACATACTTCATATGCTCTGCGTTCCCTGGACTTGTCTGTTGCTCTGTAAGAATTATCTTTGCATGATTGCATCACAAGATAGAGTATGGCATTGTGCTGCATTAGATCATGGGAAGTCAAAGAGGTTGGAATGGCTAAGGGTTCATGTTTTCTTCACTGCAATAAGATGGAATATTGCAAATTCTGGATATAAGCTTGAACGAGTTATAATCACTGTTCCTGTTGATTCTACTCAAGATGAAGCTTTATCAATTTTGAAGAAACTTAAGGTGATTGAAGATGATATTAATGCTGGAGAGTTGTGTAGTAGAAGGGAATATGCAAGGTGGCTAGTTCGTACGTATTCATCATTGGAAAGGAATCCGAAACACCATATTATTCCAGCTGTTTCGCTTTCTGGGTCAACAGTTGCTGCTTTTGATGATATAAGTTTTGAAGATCCTGATTTTGAGTCCATTCAAGCCCTAGCCGAAGCTGGTATTGTACCCAGCAAGTTATCACCAAACTATGGATATGATGGCTTGGGTGATCGAGAGAGAACTAATTTTTTTCCTGAGAGGTTTGTATCTCGCCAGACTTTGATAGACTGGAAAGCCCAGTTAGATTATGAGTTTGTTCCTGGAATGCTAGAACGGATATCAAGTACAAAGGTGGATTTTATGGACTTGAAGGAGATCAGTTCAGAAGTATCGCCACAACTGTTCATGGATATTTTAGCTGGGGACAGAAGCATTCTCAGAAAAGTTTTTGGTCGAATCAAACGGTTTCAACCAAACAAGCCTTCAACAAAAGCACAAGTAGCAGTCACACTGGCAAGTGGCAGGATGACAGAAGCAATCTCTGCTGAATTATCAAGACTGGAGTCCGAGAGCTCTGCTAGAAAAGCTGAGATAGAAGATATCACATTGGAATTGGTAGAAAGAGGAGACATACAAAGGTATTGGGATAAGAAGCTAACTGAGGAGAAGAAACGCCTTATGGAGGTGGAGGAAATTTATCTTGCTGCTGTCAGTGATCTGGGAGAGGAGAAGACGGTTCAAGAGAAGTTCTTTTCTGAGTATTTAAAGGAGAAGGCATCTATTGACTGTCAGAGGCAATTGCTCCTCAGCCTCAAGGAAGAGGTTGATGGGATAACAGAAAAGCTTCTTTCTGAGAGATCTGTATGTGAGAAAGAGCAGAGTGAGCTACGCAATATGCATGCCGATTTACAGAACCAGCTTGAAGGGATGGTTGATACGAAATCTGTGCTTGAAGCTGAGAAAGAAGCTCTCCGTATTCTTAGATCTTGGGTAGAAGACGAAGCAAGGAAAAGCCAAGCTCGTGCTAAGCATGGTTCCATATGCATCGGTCCATTGCAACAAGCGGCTAAGAATTATATTTCAGCCATGCTTTTGCTTCCCGAACCTACCCTTCTAGTCATCGTGTCCATCTTCTTTCACACTTGTTCTGTGGTAAGCTTTAACGCACCATTTTTCTTACTGCTAGGGCTTGTGGTTGCTGCTTCAATTGCAGCCTATGCAGTAAGGCAGCTCAATGTTAAAAACTCAAAGTCCGCCGCCTCTGCTGACAAGCTCACCGAAAATGGTGAAGAGAAGGAGGAGGTTAAGCATTCTAACCATGGCTTCAAAGATAATTATGGGGAGGAAGAGGAGGAAGAAGAAGTCAAGTTAATTAGTAGCGTATTTGATCAAGTTCCTGTTTATATAACTGAAGATGAAGACATTTTACCTGAGTTTGAAGAACTTCTATCTGGGGAGATCGAATTCCCATTACCTGAAATTGATGACAGTAAAGCTGAGAAGGATAGAGTATATGAAACTGAGATGGCAAACAATGCGAGTGAACTGGAGAGATTGCGCAACTTAGTAAAGGAATTGGAGGAGAGGGAAGTAAAGCTTGAAGGTGAACTGCTTGAATACTATGGATTGAAAGAACAGGAATCTGACATTACAGAGTTACAGAGGCAGCTCAAGATCAAGGCAGTAGAGATTGATATGCTCAATATTACCATTAGCTCTTTGCAGGCTGAAAGGAAGAAGCTTCAAGAAGAGATTGCACAAGATGCTACAGTGAAGAAGGAGTTGGAATTTGCAAGGAATAAGATCAAAGAGCTGCAGAGGCAGATTCAGCTTGATTCTAACCAAACAAAAGGCCAGCTATTATTACTCAAGCAACAAGTTTCCGGTCTACAGGCAAAGGAGCAAGAAACTATAAAGAAAGATACTGAACTAGAAAAGAAGTTGAAAGCTGTGAAGGAATTGGAGGTTGAAGTTATGGAACTCAAGAGGAAGAACAAAGAGCTTCAAATTGAAAAGCGGGAGTTGACCATTAAACTGGATGCTGCTGAAAATAAAATCTCGACTCTGTCCAACATGACAGAAAGTGAATTGGTATCCCAGACTAGAGAGCAAGTCAACAATTTAAGGCATGCAAATGAGGACTTGATAAAGCAAGTTGAAGGACTTCAGATGAATAGGTTCAGTGAAGTTGAAGAATTAGTGTACCTTCGTTGGGTCAATGCATGCTTAAGATATGAACTGCGCAATTACCAGGCTCCTACAGGAAAAGTATCAGCTCGTGATCTCAACAAGAATTTGAGCCCAAAATCTCAGGAGAAAGCTAAGCAACTCATGTTAGAGTATGCAGGATCAGAACGTGGACAAGGGGACACAGATCTTGAAAGCAACTACTCCCAACCATCTTCTCCTGGAAGTGAGGATTTTGACAATGCTTCAATTGATAGTTCCTTTAGTAGATATAGTAGTCTCAGTAAGAAACCTAGCTTGATCCAGAAGTTGAAGAAATGGGGTGGTAGAAGCAAAGATGATTCTAGTGCTCTTTCATCACCAGCCAGATCCTTTTCCGGGGGTTCTCCTAGCAGGATGAGCATGAGTCAAAAGCCGAGGGGTCCATTAGAATCGTTGATGCTTAGAAATGCAAGTGATAGTGTTGCAATCACCACCTTTGGTACGATGGAACAGGAAATTCCCGACTCTCCAGGCACTCCAAATCTCCCAAGTATCAGAACTCAAACTCCTAATGACTCCTTGAATTCAGTAGCATCATCATTCCAACTAATGTCTAAATCCGTTGAAGGAGTGTTAGATGAGAAATATCCAGCATATAAAGACCGACATAAGTTGGCATTAGCAAGGGAGAAGCAAATTAAGGAAAAGGCGGATCAGGCCAGAGCAGAGAGGTTTGGCAATATTTCAAATTCGAACTTAAACTCTGAATTTAAAGGTAAGACTGAGAGAGATAGATCTATAACTTTGCCGCCAAAACTTACTCAAATAAAGGAAAAACCAGTTGTATCTAGTGTTGCTACCGATGCATCTGGTGAAAATAAAACGACGGAGTCTCCAGCGATTAGCAGGATGAAACTAGCAGAGATTGAGAAGCGGCCTCCACGGACACCTAAGCCACCACCAAGACCATCAGCAGGTGCTTCTGTAAGCACAAATCCCATTCCTCAGGGTGGTGTACCAGCTGCTCCACCTCTACCACCTCCACCTCCCGGTGCCCCACCACTTCCTCCAACTGGTGGACCACCTCGTCCGCCTCCTCCTCCAGGAAGCTTGTCTAAAGGTGCTGGTGGTGATAAGGTTCATAGAGCTCCTGAGTTAGTTGAGTTCTATCAGACATTGATGAAACGAGAAGCAAAGAAGGATACTCCTTTACTTTCTTCTACGTCATCTAATGTGTCTGATGCCAGAAGTAACATGATTGGGGAGATTGAGAACAGGTCATCATTCCTCATAGCAGTAAAAGCAGATGTGGAAACTCAAGGTGATTTTGTCATGTCATTGGCAGCTGAAGTTCGAGCAGCTACATTCTCTAATATAGAGGATGTAGTGGCCTTCGTAAATTGGTTAGATGAAGAGCTATCATTCTTGGTTGATGAGAGGGCAGTCCTGAAGCATTTTGATTGGCCAGAAGGAAAGGCAGATGCATTGAGAGAGGCATCTTTTGAATACCAGGACCTTATGAAGTTGGAGAAGCGGGTCACCACGTTTGTTGATGAACCTAAACTCCCATGTGAAGCAGCTTTAAAGAAAATGTACTCCTTGCTTGAGAAGGTTGAGCAGAGTGTCTATGCACTCCTACGCACTAGAGACATGGCTATCTCGCGATATAGGGAGTTTGGAATTCCAGTTGATTGGCTGTCTGATACAGGAGTTGTTGGAAAGATTAAGCTCTCATCTGTACAATTAGCAAGGAAATACATGAAGCGTGTAGCATCAGAACTTGATGCAATGAATGAACCAGAGAAGGAGCCCAACAGAGAATTTTTGGTCTTGCAAGGCGTCCGTTTTGCTTTCCGTGTTCATCAGTTTGCGGGAGGCTTTGACGCAGAGAGCATGAAGGCTTTTGAAGAGTTGAGGAGCCGAATTCATACAACACAGATAGGAGATGACAATAAGCAGGAAGCCTGA 5061 42.86 MCSSSSFASTFSLFLTKSPSISRRRNVIYPNSHLFLGHLRPTSSTFRITASITERDLELSSWFNPDQPNNDDAYGGWIFLNSPTSVAKTEKRGLPRFVIGVVGTSLVVLFAVIAQISLSRRGFKFQWRTPLRSLEGVCSHTENVSDQGKTVEVSLTNDDLPTESGAESIPVSKINDAVTSVHCVMQIPIPLPDKEVSWMEWKNGRMKLNILHMLCVPWTCLLLCKNYLCMIASQDRVWHCAALDHGKSKRLEWLRVHVFFTAIRWNIANSGYKLERVIITVPVDSTQDEALSILKKLKVIEDDINAGELCSRREYARWLVRTYSSLERNPKHHIIPAVSLSGSTVAAFDDISFEDPDFESIQALAEAGIVPSKLSPNYGYDGLGDRERTNFFPERFVSRQTLIDWKAQLDYEFVPGMLERISSTKVDFMDLKEISSEVSPQLFMDILAGDRSILRKVFGRIKRFQPNKPSTKAQVAVTLASGRMTEAISAELSRLESESSARKAEIEDITLELVERGDIQRYWDKKLTEEKKRLMEVEEIYLAAVSDLGEEKTVQEKFFSEYLKEKASIDCQRQLLLSLKEEVDGITEKLLSERSVCEKEQSELRNMHADLQNQLEGMVDTKSVLEAEKEALRILRSWVEDEARKSQARAKHGSICIGPLQQAAKNYISAMLLLPEPTLLVIVSIFFHTCSVVSFNAPFFLLLGLVVAASIAAYAVRQLNVKNSKSAASADKLTENGEEKEEVKHSNHGFKDNYGEEEEEEEVKLISSVFDQVPVYITEDEDILPEFEELLSGEIEFPLPEIDDSKAEKDRVYETEMANNASELERLRNLVKELEEREVKLEGELLEYYGLKEQESDITELQRQLKIKAVEIDMLNITISSLQAERKKLQEEIAQDATVKKELEFARNKIKELQRQIQLDSNQTKGQLLLLKQQVSGLQAKEQETIKKDTELEKKLKAVKELEVEVMELKRKNKELQIEKRELTIKLDAAENKISTLSNMTESELVSQTREQVNNLRHANEDLIKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQAPTGKVSARDLNKNLSPKSQEKAKQLMLEYAGSERGQGDTDLESNYSQPSSPGSEDFDNASIDSSFSRYSSLSKKPSLIQKLKKWGGRSKDDSSALSSPARSFSGGSPSRMSMSQKPRGPLESLMLRNASDSVAITTFGTMEQEIPDSPGTPNLPSIRTQTPNDSLNSVASSFQLMSKSVEGVLDEKYPAYKDRHKLALAREKQIKEKADQARAERFGNISNSNLNSEFKGKTERDRSITLPPKLTQIKEKPVVSSVATDASGENKTTESPAISRMKLAEIEKRPPRTPKPPPRPSAGASVSTNPIPQGGVPAAPPLPPPPPGAPPLPPTGGPPRPPPPPGSLSKGAGGDKVHRAPELVEFYQTLMKREAKKDTPLLSSTSSNVSDARSNMIGEIENRSSFLIAVKADVETQGDFVMSLAAEVRAATFSNIEDVVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREASFEYQDLMKLEKRVTTFVDEPKLPCEAALKKMYSLLEKVEQSVYALLRTRDMAISRYREFGIPVDWLSDTGVVGKIKLSSVQLARKYMKRVASELDAMNEPEKEPNREFLVLQGVRFAFRVHQFAGGFDAESMKAFEELRSRIHTTQIGDDNKQEA 1686
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32916745 32928100 - CaPI482276_05g025100.1 Cam05g2510 127914

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2510 1686 MobiDBLite consensus disorder prediction 1278 1410 - -
Cam05g2510 1686 Coils Coil 851 923 - -
Cam05g2510 1686 MobiDBLite consensus disorder prediction 732 754 - -
Cam05g2510 1686 Coils Coil 817 844 - -
Cam05g2510 1686 Coils Coil 1006 1033 - -
Cam05g2510 1686 Coils Coil 952 1000 - -
Cam05g2510 1686 MobiDBLite consensus disorder prediction 1093 1119 - -
Cam05g2510 1686 MobiDBLite consensus disorder prediction 1097 1119 - -
Cam05g2510 1686 MobiDBLite consensus disorder prediction 1368 1402 - -
Cam05g2510 1686 Coils Coil 608 628 - -
Cam05g2510 1686 MobiDBLite consensus disorder prediction 1142 1177 - -
Cam05g2510 1686 MobiDBLite consensus disorder prediction 1150 1175 - -
Cam05g2510 1686 MobiDBLite consensus disorder prediction 727 757 - -
Cam05g2510 1686 PANTHER GPI-ANCHORED ADHESIN-LIKE PROTEIN 270 651 - -
Cam05g2510 1686 MobiDBLite consensus disorder prediction 1317 1331 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2510 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0976 Cam-Chr5:8792148 Cam05g2510 Cam-Chr5:32916745 7.10E-44 dispersed
Cam01g2422 Cam-Chr1:36118343 Cam05g2510 Cam-Chr5:32916745 2.90E-83 transposed
Cam01g2602 Cam-Chr1:37550359 Cam05g2510 Cam-Chr5:32916745 8.90E-109 transposed
Cam03g0056 Cam-Chr3:1514624 Cam05g2510 Cam-Chr5:32916745 3.50E-61 transposed
Cam05g0808 Cam-Chr5:7132344 Cam05g2510 Cam-Chr5:32916745 1.30E-71 transposed
Cam09g0027 Cam-Chr9:1215305 Cam05g2510 Cam-Chr5:32916745 4.80E-52 transposed
Cam01g0583 Cam-Chr1:6257452 Cam05g2510 Cam-Chr5:32916745 2.20E-188 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g250 . . . . . . . . Cmo04g01614 . . . Car04g01591 . . . Cpe01g01370 Bhi07g01379 . . Lac13g0450 . . . Cla05g02336 Cam05g2510 Cec05g2534 Cco05g2577 Clacu05g2504 Cmu05g2366 Cre05g2483 Cone13ag0862 Cone19ag0862 . . Lsi04g00297 Csa05g02571 . Cme10g00299 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008211 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 35