Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2517 ATGCGATCGCCTCAGATCCTACCTATCACCCAGCCCCCTCCGTTGTCTCCATTTTCCTCCGGGGGCTCCGCCGCAAATTCGATTATGGCAACCACATCTACTGCCATAGACATAATGTTGCTTAAAGAAGACGATGAACAGACGACTGGAGTTCTTGTTTCTCCGTTGTTCGAGGATGATAAGACGATAGCTCATAAGCCCCTTCTTCCTAGGACTTCAAGCTATGCCTCCTCCACATCCAGTTCCTCCTCAGGAAGCTGTATGTACAAGCAGAAGCGGAGGCGAGTTAAGAGCGAAGACCTTTTGTCCTTTCTCTCCGGTGATGTCCGCCACCAGACTGTTGATCATGATGTCGAGAATGTCGATGTTGAGAGAGCTGAGAGATTTCTACTGACTCGCTTCGGTTTGAAACTCTCGAAATATATTCGGGTAGCATTCAGATGGATTGCAAGATTTCTCGCACTTGGTTGCTATTCATTGTTTCTTCTTCCAGGTTTTCTTCAAGTTGGATACTATTATTTCTCATCCAGTCAGATACGCAGAAGTATACCCTATGGTGATAAACCGAGGAATAAGTTGGATCTTTATCTTCCAAAACATATTGACGGGCCAAAACCAGTTGTTGCATTTATCACTGGTGGGGCTTGGATTATTGGCTACAAAGCTTGGGGTTGTCTTCTAGGACAACAATTATCAGAAAGAGATGTCATTGTAGCATGCATCGATTACAGAAATTTTCCTCAGGGAACCATGAGTGATATGATTGATGATGCTTCCCAAGGTATCTCGTTCTTGTGTAATAATATTAGAGAATTTGGAGGCGATCCAAACAGAATTTATCTAATGGGTCAGTCAGCTGGCGCACATATAGCTGCCTGCACACTTTTGGAGCACGCAATGAAAGAGGTTCGCAAAGTAGAAAGTATCTCTTGGAGTGTGTCCCAGATCAAAGCTTATTTTGGTTTGTCAGGAGGGTATAATTTGCTCAATCTGGTAGACTACTTTCACTCTCGAGGTCTATCTCGTTCTCTTTTTCTAAGCATAATGGAAGGAGAACAATCCTTGAAACGATTTTCACCCGAAGTAATGATCTTGGAAGAACCCAACATAGGACCAGCAGTCTCGATTCTTCCTCCCATCATTTTATTCCATGGAACAGCAGACTATTCTATACCATCAGATGCTAGTAAAACTTTTGCTGAGGCTCTTCAAAGCGTTGGAGTGAAAGCCGAAACATTTTTCTATGAAGGAAAGACGCATACAGATGTATTTGTTCAGGATCCGTTGAGGGGTGGGAGAGATCAGATGTTTGAAGATCTTGTTGCGATCATCCATGCCAATGATGCAGAAGCATTGGCGAAAGATGCGGTGGCACCTCCAAGAAGACGCTTTGTACCTGAATTTATGTTGATGTTGGCTCGTAGTGTTAGCCCCTTCTAA 1440 43.75 MRSPQILPITQPPPLSPFSSGGSAANSIMATTSTAIDIMLLKEDDEQTTGVLVSPLFEDDKTIAHKPLLPRTSSYASSTSSSSSGSCMYKQKRRRVKSEDLLSFLSGDVRHQTVDHDVENVDVERAERFLLTRFGLKLSKYIRVAFRWIARFLALGCYSLFLLPGFLQVGYYYFSSSQIRRSIPYGDKPRNKLDLYLPKHIDGPKPVVAFITGGAWIIGYKAWGCLLGQQLSERDVIVACIDYRNFPQGTMSDMIDDASQGISFLCNNIREFGGDPNRIYLMGQSAGAHIAACTLLEHAMKEVRKVESISWSVSQIKAYFGLSGGYNLLNLVDYFHSRGLSRSLFLSIMEGEQSLKRFSPEVMILEEPNIGPAVSILPPIILFHGTADYSIPSDASKTFAEALQSVGVKAETFFYEGKTHTDVFVQDPLRGGRDQMFEDLVAIIHANDAEALAKDAVAPPRRRFVPEFMLMLARSVSPF 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 32992084 32995296 - CaPI482276_05g025170.1 Cam05g2517 127921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2517 479 ProSitePatterns Carboxylesterases type-B serine active site. 272 287 IPR019826 -
Cam05g2517 479 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 108 445 IPR050300 GO:0016298(PANTHER)
Cam05g2517 479 Gene3D alpha/beta hydrolase 173 428 IPR029058 -
Cam05g2517 479 Pfam BD-FAE 193 403 IPR049492 -
Cam05g2517 479 FunFam Isoprenylcysteine alpha-carbonyl methylesterase ICME 174 428 - -
Cam05g2517 479 SUPERFAMILY alpha/beta-Hydrolases 181 445 IPR029058 -
Cam05g2517 479 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g1349 Cam-Chr5:14764386 Cam05g2517 Cam-Chr5:32992084 7.90E-136 dispersed
Cam05g2517 Cam-Chr5:32992084 Cam06g0928 Cam-Chr6:13845764 1.00E-144 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2517 K15889 - csv:101206426 869.766