Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam05g2521 | ATGGCGGCCGTATCACCGGCGCCTAATTCATCTCCGTCGCCGGCTTCTCCCTCGCCTCCATCTCCGCCGCCTCCGGTCGCATCTAATTCCCCACCTAGTACTCCGTCACTGTCGCCGCCGCAACAATCGCCTCCTCCGAATCCGTCTGACTCCGGGACTCCCACTTCATCTCCTCCTCCGCCGTCTCGTCAACCATCTGCTGCTTCACCTCCACCTGCATCTGAAACTCCGCCGCCATCAACACCCGCATTGTCTCCTCCGCCGCCTCGGATGGTTCCGCCGGCAACTCCACCATCAACTCCGTCCAATGCTCCACCCCCATCAACACCGGACCCTCCACCACCATCGGCAACCCCACCAGTAAGCTCCACTCCACCAACGCCATCTAATTCCCCACCAAATTCATCTCCACCTCCTGCAGCACAGCCTCCTCAATCCCCTCCACAATCATCAAAACCACCTGAAAACCCCCCTCCGCTGCCGCCGCCACCACCACAAGCAAACCCGCCGGATAATCCAGCGCCGCCGCCACAGCCCACAAACCCACCTGGGAATTCACCTCCTACGCCACCATCAGCACTGCCTCCAGCTACCTCACCTCCTTCCCCAGCATCCATACCTCCAAGAAATTCACCTCCACCCCCAAGGCTTACTCCTCCTCCCGGTGAGCCCTCACTTTCAAGTCCTCCTCCCAGGTCATCACCGCCCCCATCTCCTCCACCACCGCCGCCGTCACATCTTTCTCCTCCATTACCGTCTAAACCCCCAACATTGCCGTCAGGAAATCGTACGGACGATGGTTCTGGTCCTATTGATGGAGGAGCAAACTCGAAATCCAACAGCAATGGAGGGATCAGTAGTGGGGGTGTGATCGCCATTGGAGTAGTGGCAGGAATTGTAGTGCTTTCCATAATTGGGTTTGTTGTTTGGTACATCAGGAGGCCAAGGAAAAATGATTCTGGGCGTGGAGGTTACATTATGCCATCCTCTCTGGGCTCCTCTCCTAAGTCGGAAACATCCCTTATGAAGGTCCATTCCACAGTTCATCAAGACATACATGCCAGTGGCAGTGGCAGTGGTGGAATATACACTCCAAAAGAGCTTGGTGGGTTGGGCAGTTCGAGGCCATTGTTTACATACGAAGAACTCTTCAAAGCAACAGATGCATTTTCTACTCAGAACCTTTTAGGAGAAGGAGGATTTGGTTCTGTTTATAAAGGATATCTACCAGATGGAAGAGTGGTTGCAGTGAAGGAGCTAAAGATTGGTGGTGGTCAGGGTGAGCTGGAATTCAAAGCTGAAGTTGAGATTATTGGTCGTGTACACCATCGCCATTTGGTTTCTCTTGTGGGCTATTGTATTTCAGAGCATCAAAGGTTGCTGGTCTATGATTATGTCCCTAACAATTCCCTTTACTACCATCTTCATCTCAAAGGGGATGGTGAGCTCGTTCTGGAATGGACAAAGCGCATTAAGATCGCAGCTGGTGCAGCTCGGGGAGTTGCTTATCTTCATGAAGACTGCCACCCTCGAATTATCCACCGTGATATCAAATCTTCAAACATTCTTCTAGATGAAAATTTTGAAGCTCGGGTTTCTGACTTTGGGCTTGCTAAATTAGCTCTCGACGAACAAACTCATATAACAACCCGTGTTGTAGGAACTTTTGGATATGTTGCCCCTGAATATGCATCGAGTGGAAAGTTAACTGAGAGGTCAGATGTATATTCTTTTGGAGTTGTACTTCTTGAGCTGATTACTGGTCGAAAGGCTGTGGACGCATCCCAACCAATGGGGAATGAGAGCCTTGTCGAATGGGCTCGGCCTTTACTAAACCATGCACTCGACAGCCAAGATTTCGAAAAATTGGTGGACCCAAGGCTTGAAAGGAACTACGTCGAGAGTGAAATGTTGGGGATGATAGGAATAGCTGCTGCTTGCGTGCGGCACGCGTCTGCCAAGAGACCGCAGATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGCCACAGCAGATTTAAGTAATGGAATGAGATTCGGGGAGAGTCAAGCTTTCGACTCCGGTCAACAATCTGCTGAAATTAGATTTTTCCGAATGCTGGCCTTCGGTAACCAAGATTACAGTTCAGACTTTTATAGCCAAGGTAGCTCAAATGCCTGA | 2160 | 51.02 | MAAVSPAPNSSPSPASPSPPSPPPPVASNSPPSTPSLSPPQQSPPPNPSDSGTPTSSPPPPSRQPSAASPPPASETPPPSTPALSPPPPRMVPPATPPSTPSNAPPPSTPDPPPPSATPPVSSTPPTPSNSPPNSSPPPAAQPPQSPPQSSKPPENPPPLPPPPPQANPPDNPAPPPQPTNPPGNSPPTPPSALPPATSPPSPASIPPRNSPPPPRLTPPPGEPSLSSPPPRSSPPPSPPPPPPSHLSPPLPSKPPTLPSGNRTDDGSGPIDGGANSKSNSNGGISSGGVIAIGVVAGIVVLSIIGFVVWYIRRPRKNDSGRGGYIMPSSLGSSPKSETSLMKVHSTVHQDIHASGSGSGGIYTPKELGGLGSSRPLFTYEELFKATDAFSTQNLLGEGGFGSVYKGYLPDGRVVAVKELKIGGGQGELEFKAEVEIIGRVHHRHLVSLVGYCISEHQRLLVYDYVPNNSLYYHLHLKGDGELVLEWTKRIKIAAGAARGVAYLHEDCHPRIIHRDIKSSNILLDENFEARVSDFGLAKLALDEQTHITTRVVGTFGYVAPEYASSGKLTERSDVYSFGVVLLELITGRKAVDASQPMGNESLVEWARPLLNHALDSQDFEKLVDPRLERNYVESEMLGMIGIAAACVRHASAKRPQMGQVVRAFDSLATADLSNGMRFGESQAFDSGQQSAEIRFFRMLAFGNQDYSSDFYSQGSSNA | 719 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 33057827 | 33061542 | - | CaPI482276_05g025210.1 | Cam05g2521 | 127925 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam05g2521 | 719 | MobiDBLite | consensus disorder prediction | 10 | 257 | - | - | |
Cam05g2521 | 719 | Pfam | Protein kinase domain | 391 | 599 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam05g2521 | 719 | FunFam | proline-rich receptor-like protein kinase PERK8 | 466 | 679 | - | - | |
Cam05g2521 | 719 | ProSiteProfiles | Protein kinase domain profile. | 390 | 668 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam05g2521 | 719 | SUPERFAMILY | Protein kinase-like (PK-like) | 373 | 663 | IPR011009 | - | |
Cam05g2521 | 719 | MobiDBLite | consensus disorder prediction | 1 | 282 | - | - | |
Cam05g2521 | 719 | ProSitePatterns | Protein kinases ATP-binding region signature. | 396 | 418 | IPR017441 | GO:0005524(InterPro) | |
Cam05g2521 | 719 | CDD | STKc_IRAK | 396 | 668 | - | - | |
Cam05g2521 | 719 | SMART | serkin_6 | 390 | 669 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam05g2521 | 719 | Gene3D | Phosphorylase Kinase; domain 1 | 367 | 465 | - | - | |
Cam05g2521 | 719 | PANTHER | PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 | 253 | 697 | IPR047117 | - | |
Cam05g2521 | 719 | PRINTS | Proline rich extensin signature | 1 | 22 | - | - | |
Cam05g2521 | 719 | PRINTS | Proline rich extensin signature | 61 | 86 | - | - | |
Cam05g2521 | 719 | PRINTS | Proline rich extensin signature | 42 | 59 | - | - | |
Cam05g2521 | 719 | PRINTS | Proline rich extensin signature | 24 | 40 | - | - | |
Cam05g2521 | 719 | Gene3D | Transferase(Phosphotransferase) domain 1 | 466 | 682 | - | - | |
Cam05g2521 | 719 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 512 | 524 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam05g2521 | 719 | FunFam | Proline-rich receptor-like protein kinase PERK8 | 363 | 465 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g0795 | Cam-Chr1:8878420 | Cam05g2521 | Cam-Chr5:33057827 | 1.80E-61 | dispersed | |
Cam05g2084 | Cam-Chr5:29432977 | Cam05g2521 | Cam-Chr5:33057827 | 3.20E-38 | dispersed | |
Cam05g2521 | Cam-Chr5:33057827 | Cam11g0552 | Cam-Chr11:6992725 | 4.70E-149 | dispersed | |
Cam07g1650 | Cam-Chr7:31067558 | Cam05g2521 | Cam-Chr5:33057827 | 2.50E-59 | dispersed | |
Cam11g0466 | Cam-Chr11:6133566 | Cam05g2521 | Cam-Chr5:33057827 | 1.00E-39 | dispersed | |
Cam11g1739 | Cam-Chr11:29983053 | Cam05g2521 | Cam-Chr5:33057827 | 2.10E-64 | dispersed | |
Cam05g2521 | Cam-Chr5:33057827 | Cam05g2526 | Cam-Chr5:33114733 | 7.10E-69 | proximal | |
Cam01g0116 | Cam-Chr1:1433136 | Cam05g2521 | Cam-Chr5:33057827 | 3.00E-43 | transposed | |
Cam01g2391 | Cam-Chr1:35861841 | Cam05g2521 | Cam-Chr5:33057827 | 6.00E-46 | transposed | |
Cam02g2325 | Cam-Chr2:35808221 | Cam05g2521 | Cam-Chr5:33057827 | 3.10E-30 | transposed | |
Cam05g1172 | Cam-Chr5:10969562 | Cam05g2521 | Cam-Chr5:33057827 | 1.70E-63 | transposed | |
Cam07g1232 | Cam-Chr7:26699487 | Cam05g2521 | Cam-Chr5:33057827 | 9.70E-56 | transposed | |
Cam01g0603 | Cam-Chr1:6519930 | Cam05g2521 | Cam-Chr5:33057827 | 5.00E-42 | wgd | |
Cam03g0674 | Cam-Chr3:7689807 | Cam05g2521 | Cam-Chr5:33057827 | 2.30E-33 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85217 | PF00069 | Pkinase | 3.10E-43 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam05g2521 | - | - | - | 0.0 |