Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2530 ATGGCAATCTCAAATAGAGTTTATGAAGTGATGATGATGGTTTGTGTTTTCTTTGTTGTGACCCACAGCTTGTTTGAAACAGGGGAGCCTCCATTGACATTGGATTACTATGCCAAAACCTGTCCCAATGTGTTGCAAGTTGTGAGGAAAGAAATGGAGTGTGCAGTGCTTTCTGAACCACGTAATGCAGCTTTTGTTGTCCGATTACACTTTCACGACTGCTTTGTTCAGGGATGCGACGGGTCGATTCTGCTGGACGACACTATAACATTAGAGGGAGAAAAAAAGGCTTCCAACAACATACACTCCCTCAAAGGCTTTAGAATCATTGATAGGATAAAGAACAGCCTTGAATCAGAATGTCCTGGGATTGTTTCTTGTGCAGATATACTCACTATTGCAGCCAGGGATGCAGTGATTCTGGTGGGTGGCCCTTACTGGGAGGTTCCTCTTGGAAGAAAGGATTCCACAACTGCAAGTTATGAACTTGCAAACACAAATCTTCCCTCTGCCAATGAGGGCCTTCTCAGCATTATCTCCAAGTTTCTTTATCAGGGTCTCTCTGTCACTGACATGGTAGCTCTATCAGGAGCGCACACGATCGGAATGGCGAGGTGCGAGAATTTCAGAGAAAGGATTTATGGGGATTTGGAAGCGACTTCAGATACAAACAACCCGATTTCGAAGTCGTATATTGAGAAGTTGAGGTCAATTTGCCCCCAAGTTGGGAAAGCAGCAGAGAACAACATAACAGCAATGGACAATGTGACACCAGAGCTGTTTGACAACTCTTATTTCCACATGTTGATGAGAGGAGAAGGGGTTTTGAAATCAGACCAAGAATTGTATTCAAGCCTTTTGGGAATGGAAACCAAGGCATTGGTGAAGAAATATGCTGCTGATCCACTTGCTTTCTTTCAGCAATTCTCTGATTCCATGGTGAAGTTGGGAAATATCACCAATTCTGATAGCTTTTTCACTGGGGAAGTTAGGAAAAATTGCAGGTTTATCAACACATAA 1020 43.14 MAISNRVYEVMMMVCVFFVVTHSLFETGEPPLTLDYYAKTCPNVLQVVRKEMECAVLSEPRNAAFVVRLHFHDCFVQGCDGSILLDDTITLEGEKKASNNIHSLKGFRIIDRIKNSLESECPGIVSCADILTIAARDAVILVGGPYWEVPLGRKDSTTASYELANTNLPSANEGLLSIISKFLYQGLSVTDMVALSGAHTIGMARCENFRERIYGDLEATSDTNNPISKSYIEKLRSICPQVGKAAENNITAMDNVTPELFDNSYFHMLMRGEGVLKSDQELYSSLLGMETKALVKKYAADPLAFFQQFSDSMVKLGNITNSDSFFTGEVRKNCRFINT 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33137314 33140780 - CaPI482276_05g025300.1 Cam05g2530 127934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2530 339 Gene3D Peroxidase, domain 2 169 316 - -
Cam05g2530 339 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Plant peroxidase signature 311 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 ProSiteProfiles Plant heme peroxidase family profile. 31 338 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 SUPERFAMILY Heme-dependent peroxidases 32 338 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cam05g2530 339 Pfam Peroxidase 48 301 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 PANTHER PEROXIDASE 72-RELATED 12 337 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam05g2530 339 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Cam05g2530 339 FunFam Peroxidase 169 316 - -
Cam05g2530 339 Gene3D - 36 338 - -
Cam05g2530 339 FunFam Peroxidase 35 176 - -
Cam05g2530 339 CDD secretory_peroxidase 32 337 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2530 Cam-Chr5:33137314 Cam09g1229 Cam-Chr9:13954590 8.30E-80 dispersed
Cam05g2530 Cam-Chr5:33137314 Cam11g0604 Cam-Chr11:7585411 3.90E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2530 K00430 - csv:101216779 605.134