Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2556 ATGGGGAAAACCGGGGCCAAGTTGCCAAGTTTCTGCCTGAACCGGATCCGGCCTCATGTTCGAGTTCCTATTCAATCCAAACCGGACTCTGTTTCTGTAAAAACCGGTCCTAACAAGAAGGCTGATGATTCCGTTGATGACATTCAAGTTGGAGCTAAGCCAGTTTTGGGAATTGGAAGGAAGATCATGATTGTGGTTGATTCCACCATTGAAGCTGAAGGAGCTCTTCATTGGGCTCTCTCTCACACTGTCCAAAATCAAGACAACATTCTTCTTCTTCATCTCACTAAGCCTTCAACGTCAAAAGGAGAAGGACTGAGTAAGGAGACAGCACCAAGAGCTTATGAATTGGTTCATTCCATGAGAACTTTATGCCAATTGAAGAGACCTGAGGTGGAAACGGAAGTTGCGGTGGTGGAAGGAGGGAAGGAGAAAGGGGCAGTGATAGTGGAAGAAGCGAGAAAGCGAGGGGTGTCGTTGCTGGTTTTGGGGCAGAAGAAACGGTCGACAACATGGCGGCTTCTGATGGTGTGGGCAGGCCACCGGTGGGGCGGCGGAGGCGGTGGCGGTGGCGGTGGCGGTGTGGTGGAGTATTGTATACAAAATGCGAGCTGTATGGCGATTGCGGTGAGAAGGAAGAGCAAGAAATTGGGTGGTTATTTGATCACTACAAAGCGTCAAAAGGATTTCTGGCTTTTGGCTTAA 705 49.36 MGKTGAKLPSFCLNRIRPHVRVPIQSKPDSVSVKTGPNKKADDSVDDIQVGAKPVLGIGRKIMIVVDSTIEAEGALHWALSHTVQNQDNILLLHLTKPSTSKGEGLSKETAPRAYELVHSMRTLCQLKRPEVETEVAVVEGGKEKGAVIVEEARKRGVSLLVLGQKKRSTTWRLLMVWAGHRWGGGGGGGGGGGVVEYCIQNASCMAIAVRRKSKKLGGYLITTKRQKDFWLLA 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33332403 33333309 - CaPI482276_05g025560.1 Cam05g2556 127960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2556 234 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 60 214 - -
Cam05g2556 234 CDD USP_Like 61 210 - -
Cam05g2556 234 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 1 234 - -
Cam05g2556 234 Pfam Universal stress protein family 60 211 IPR006016 -
Cam05g2556 234 Gene3D HUPs 59 218 IPR014729 -
Cam05g2556 234 MobiDBLite consensus disorder prediction 25 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2556 Cam-Chr5:33332403 Cam11g1592 Cam-Chr11:28667111 1.60E-21 dispersed
Cam04g1191 Cam-Chr4:25986926 Cam05g2556 Cam-Chr5:33332403 3.20E-43 wgd
Cam05g2556 Cam-Chr5:33332403 Cam06g1683 Cam-Chr6:28209725 4.90E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2556 - - - 0.0