Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2577 ATGGCAGCATTGCGATTATCATCGCCCTGTGTTAATTCTAATAATCCACAATCCCCAAAACTCAAATTCCCATCCACCTTCGCTTCAGAGTCTAGTTTCGGGACCAATTGGACGAGGCTTCTGTTGTTCAGAGCTTCGTTCTCGAGTTCTTCAAGAAGGAAGCTGTGCATTAGAAACGTAGCCAGCGATCGACAGAAACAACTGAAGCAGCCGGTCAACGGAGAAGTTGTAGACGACTTCGATAGCTTTCTTCCAGATTCGGCGTCCATTGCTGCAAGTATTAAGTACCATTCGGAATTCACGCCTTCTTTCTCACCGGAGGGCTTTGGGCTTTCTAAGGCATACTATGCAACTGCTGAAAGTGTTCGTGATATGCTTATCATCAACTGGAATGCTACGTATGAGTACTATGAAAAAATGAATGTGAAGCAGGCCTACTATCTGTCGATGGAGTTTTTACAGGGTAGGGCATTGCTAAATGCAATTGGAAATCTGGAACTATCAGGAATTTATGCAGATGCTTTAAGAGTGTTAGGATGTAATCTCGAGGAGGTAGCACGGCAGGAATCGGATGCTGCACTAGGAAATGGAGGATTAGGGCGGCTTGCTTCCTGCTTTCTGGACTCCCTGGCAACACTAAACTATCCAGCATGGGGATATGGACTGAGATACAAGTATGGTTTGTTCAAACAGCTTATTACAAAAGATGGACAGGAGGAAGTGGCCGAAAATTGGCTAGAGATGGGCAATCCCTGGGAAATTGCAAGACACGACATCTCCTATCCTGTGAAATTCTATGGTGAAGTCATTTCAGGCGCAGATGGAAGCAAGCAATGGGTTGGAGGAGAAAATATCACTGCTGTTGCCTATGATGTCCCAATACCAGGTTATAAAACTAAAACCACGATAAACCTCCGTTTGTGGTCCACAAAGGTTGCTCCCGAACAATTTAATTTGAGTTCTTTCAATGTTGGAGATCATGCCAATGCATATGCAGCCATAAAGAAAGCTGAAAAGATCTGTTACGTACTGTACCCTGGAGACGAGTCACTGGAGGGAAAGACTCTTAGACTGAAACAGCAATACACATTGTGCTCTGCTTCCCTTCAAGATATTGTCGCACGTTTTGAGAGGAGATCCGGGGAGACTGTGGACTGGGAAAATTTTCCAGAAAAGGTTGCTGTGCAGATGAATGATACCCATCCTACACTTTGTATCCCTGAGCTGATAAGAATATTGATGGATGTGAAAGGGTTAACCTGGAAAGAAGCTTGGGACATCACTCGTAGAACTGTAGCCTACACAAATCATACAGTTCTGCCGGAGGCGCTGGAAAAATGGGGTTTCCCCCTCATGCAGGAACTACTTCCTCGACATGTTCAGATAATTGAAATGATTGACGAGGAGCTTATCCATTCCATCATTGCTAAGTACGGTACAAAAGATCTTGAGTTGTTGCAGCAAAAGCTGAAGCAAATGAGAGTTCTAGAAAATTTTGAATTACCAGACTCGGTAATGGAACTTCTAGTAAATTCAGCGGAGTCTGCGGTAGCAGTTGATCTCGTTGAGGAAGCTGAAATTCTGGATGAGGAATCATTACCTGGTAAAGAAGTAGACGAGAATGAAGACAAAAGTATTGCGAAGAAAATAAATATTTCATTTAAAGTTGATCCAAAGCATCCAAAGATGATTCGCATGGCTAATTTGTCTGTTGTTGGTGGATATGCTGTAAATGGTGTTGCTGAAATTCATAGTGAAATTGTTAGAACTGAAGTTTTTAGCGACTTTTATGAGTTGTGGCCTAAGAAATTTCAAAACAAAACGAACGGAGTGACACCGAGAAGATGGCTCCGTTTTTGCAATCCGGACCTGAGTAAAATCATCACAAAGTGGACTGGAACAGAGCACTGGGTGACAGATACTGAAAAACTGGCAATACTCCGAGAGTTCGCTGATAACGAGGATCTCCAGTCCATGTGGGAGGAAGCTAAAAGAATAAACAAATTGAAAGTTGTCTCTTTTCTTAAAGAAAAAACTGGCTATTTAGTCAGCCCTGATGCAATGTTTGACGTACAGGTAAAACGCATCCATGAATACAAGCGGCAGTTGTTGAACATCCTGGGGATCGTCTATCGTTATAAACAAATGAAAGAAATGACTCAACAGGAAAGAGAAGCCAAGTTTGTTCCTCGAGTTTGTATATTTGGCGGGAAAGCATTTGCTACATATGTCCAGGCCAAAAGGATTGTGAAATTCATTGTTGATGTTGGAGCTACAGTCAATAACGATCCTGATATAGGAGATCTTTTGAAGGTAGTCTTTGTTCCAGATTACAATGTGAGTGTAGCAGAAGTGCTCATTCCTGGCAGTGATCTTTCCCAGCATATCAGCACGGCTGGAATGGAGGCCAGTGGTACCAGCAACATGAAGTTTGCAATGAGTGGCTGTGTACTAATTGGAACATTAGATGGAGCAAATGTAGAGATAAGAGAAGAAGTTGGAGAAGACAACTTTTTCCTCTTTGGTGCAAGGGCTCATGAAATTGCTGGCCTAAGAAGAGAAAGAGCTGAAGGCAAGTTTGTTCCTGACCCACGGTTTGAGGAAGTGAAGGCCTTCGTAAGAAGTGGGGTTTTTGGTTCCAATAACTATGAAGAACTCATGGGATCTTTAGAAGGAAATGAAGGTTATGGTCGGGCAGACTATTTCCTCGTTGGCAAGGACTTCCCTAGTTACATAGAGTGCCAAGACAGGGTTGATGAGGCCTATCGAGATCAAAAGAGATGGACCAAGATGTCGATCTTAAACACAGCTGGTTCATTCAAGTTCAGCAGTGACAGAACCATTCATGAGATCATTCCTAGGAGTCACTTAAATTGTCGAGCGAATTCAACTAAGAATCACTGCAATCCGACCTAG 2916 42.9 MAALRLSSPCVNSNNPQSPKLKFPSTFASESSFGTNWTRLLLFRASFSSSSRRKLCIRNVASDRQKQLKQPVNGEVVDDFDSFLPDSASIAASIKYHSEFTPSFSPEGFGLSKAYYATAESVRDMLIINWNATYEYYEKMNVKQAYYLSMEFLQGRALLNAIGNLELSGIYADALRVLGCNLEEVARQESDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEVAENWLEMGNPWEIARHDISYPVKFYGEVISGADGSKQWVGGENITAVAYDVPIPGYKTKTTINLRLWSTKVAPEQFNLSSFNVGDHANAYAAIKKAEKICYVLYPGDESLEGKTLRLKQQYTLCSASLQDIVARFERRSGETVDWENFPEKVAVQMNDTHPTLCIPELIRILMDVKGLTWKEAWDITRRTVAYTNHTVLPEALEKWGFPLMQELLPRHVQIIEMIDEELIHSIIAKYGTKDLELLQQKLKQMRVLENFELPDSVMELLVNSAESAVAVDLVEEAEILDEESLPGKEVDENEDKSIAKKINISFKVDPKHPKMIRMANLSVVGGYAVNGVAEIHSEIVRTEVFSDFYELWPKKFQNKTNGVTPRRWLRFCNPDLSKIITKWTGTEHWVTDTEKLAILREFADNEDLQSMWEEAKRINKLKVVSFLKEKTGYLVSPDAMFDVQVKRIHEYKRQLLNILGIVYRYKQMKEMTQQEREAKFVPRVCIFGGKAFATYVQAKRIVKFIVDVGATVNNDPDIGDLLKVVFVPDYNVSVAEVLIPGSDLSQHISTAGMEASGTSNMKFAMSGCVLIGTLDGANVEIREEVGEDNFFLFGARAHEIAGLRRERAEGKFVPDPRFEEVKAFVRSGVFGSNNYEELMGSLEGNEGYGRADYFLVGKDFPSYIECQDRVDEAYRDQKRWTKMSILNTAGSFKFSSDRTIHEIIPRSHLNCRANSTKNHCNPT 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33479181 33485577 - CaPI482276_05g025770.1 Cam05g2577 127981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2577 971 FunFam Alpha-1,4 glucan phosphorylase 611 943 - -
Cam05g2577 971 Gene3D Glycogen Phosphorylase B; 614 943 - -
Cam05g2577 971 Gene3D Glycogen Phosphorylase B; 80 613 - -
Cam05g2577 971 Pfam Carbohydrate phosphorylase 177 496 IPR000811 GO:0005975(InterPro)|GO:0008184(InterPro)
Cam05g2577 971 Pfam Carbohydrate phosphorylase 549 950 IPR000811 GO:0005975(InterPro)|GO:0008184(InterPro)
Cam05g2577 971 PIRSF Glucan_phosphorylase_GlgP 105 968 IPR000811 GO:0005975(InterPro)|GO:0008184(InterPro)
Cam05g2577 971 CDD GT35_Glycogen_Phosphorylase 93 950 - -
Cam05g2577 971 FunFam Alpha-1,4 glucan phosphorylase 84 512 - -
Cam05g2577 971 PANTHER GLYCOGEN PHOSPHORYLASE 62 950 IPR000811 GO:0005737(PANTHER)|GO:0005975(InterPro)|GO:0005980(PANTHER)|GO:0008184(PANTHER)|GO:0008184(InterPro)|GO:0030170(PANTHER)
Cam05g2577 971 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 85 950 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0637 Cam-Chr3:7204858 Cam05g2577 Cam-Chr5:33479181 1.50E-222 dispersed
Cam05g2577 Cam-Chr5:33479181 Cam07g0744 Cam-Chr7:17744850 0.00E+00 dispersed
Cam05g2577 Cam-Chr5:33479181 Cam02g2045 Cam-Chr2:33432112 1.40E-297 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2577 K00688 - csv:101221746 1736.08