Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2637 ATGGATGGTGAAAATGGGATCCGAAGACCTAATTTTCCATTACAATTGTTGGAGAAGAAAAAGGAAGAACAACAACAGCCATGTTCCTCCTCCGCAAACAACGGAGGAACAACAACGACGACAATAACAACAACTCCAAATCCAAATCTTCAATCTTCTTCTTCACCCAAGAAGCCACCTCCCAAAAGGGCCACCACCAAAGACCGTCACACAAAAGTCGATGGCCGTGGCCGTCGGATTCGTATGCCTGCCCTTTGTGCTGCTAGGGTTTTTCAACTCACTCGAGAGCTCGGCCACAAGTCCGATGGCGAAACAATTGAGTGGCTTCTACAACAAGCTGAGCCTGCCGTTATTGCTGCAACCGGTACTGGTACCATTCCAGCTAATTTCACTTCTCTTAATATCTCCCTCCGTAGCTCCGGCTCCACCATTTCCGCTCCTTCTCATCTTCGGACGAGCTATTTTAGTCCCACGCAATTCGCCGTCAGAACAAGATCCGATCTTTGGGACAGAAACAACAATCATAATCATAATCTCGTGGATGATTCCTCTACGTTCTTGAATTTCAACGCTCCTAATTATGTGAACGTGTTCAAGCAAGATCAAGGTGGGATTGACGTCACCGAGGCGGGAAAGAAACGGCGGTCGGAGCAGTCAGAATCATCGTCGGATAATTATTTGGTTCAAACGAGTACCGGGTCAATTCCAGCGAGTCAAAGCAGTCCATTGCCGGCGACATTTTGGATGGTGACGAATCCAAGCAATCAAGGGAGTGATCCGATGTGGACATTTCCGTCGGTGGGTAACAGCAGCATGTTGAGAGGGGCGGGGGCGGGTGGTGGCGGCGGCGGCGGCGGCGGGGGATTTCATTTCATGAATCTGCCACCACCAATGGCACTTTTGCCAAGTGGACAACAGTTGGGGACAGGAATCGGCAGTGGCGGTGGTCCGGCGACGGAGAGCCACTTGGGGATGTTGGCTGCTCTAAGTGCTTATAGAACAACGATGCCGGGATTGTCAGTTTCAGAATCTCCAACATCAAATAATCCTGATCAATCATAG 1062 49.91 MDGENGIRRPNFPLQLLEKKKEEQQQPCSSSANNGGTTTTTITTTPNPNLQSSSSPKKPPPKRATTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTISAPSHLRTSYFSPTQFAVRTRSDLWDRNNNHNHNLVDDSSTFLNFNAPNYVNVFKQDQGGIDVTEAGKKRRSEQSESSSDNYLVQTSTGSIPASQSSPLPATFWMVTNPSNQGSDPMWTFPSVGNSSMLRGAGAGGGGGGGGGGFHFMNLPPPMALLPSGQQLGTGIGSGGGPATESHLGMLAALSAYRTTMPGLSVSESPTSNNPDQS 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 33849672 33850733 + CaPI482276_05g026370.1 Cam05g2637 128041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2637 353 MobiDBLite consensus disorder prediction 221 239 - -
Cam05g2637 353 MobiDBLite consensus disorder prediction 26 60 - -
Cam05g2637 353 MobiDBLite consensus disorder prediction 1 79 - -
Cam05g2637 353 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 31 321 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Cam05g2637 353 Pfam TCP family transcription factor 65 178 IPR017887 -
Cam05g2637 353 ProSiteProfiles TCP domain profile. 66 120 IPR017887 -
Cam05g2637 353 MobiDBLite consensus disorder prediction 209 239 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2637 Cam-Chr5:33849672 Cam06g0212 Cam-Chr6:3923488 2.20E-27 dispersed
Cam11g1373 Cam-Chr11:26425977 Cam05g2637 Cam-Chr5:33849672 9.20E-38 transposed
Cam04g1275 Cam-Chr4:26628138 Cam05g2637 Cam-Chr5:33849672 4.70E-44 wgd
Cam05g2637 Cam-Chr5:33849672 Cam06g1770 Cam-Chr6:28886272 4.50E-68 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52037 PF03634 TCP 3.90E-38 No_clan Cam TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2637 - - - 0.0