Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g2681 ATGAGTGGATGGGATAGGGTTAGACCATCGAGTTCGAGATTTGGGCGGGGTAATTCTGCAATGCACGAGAGGACCACCTCTACTACAACGGTTCGACTCGGACGAGTCCAGCCGCAGGCCCCTGGACATCGCACCATCTTCTGCAATGATCGCGACGCTAATCTTCTTGTCAAATTCAAGGGGAATTCAGTTTCGACGACTAAGTACAACTTCTTCACTTTCTTTCCGAAAGGGTTGTTTGAACAGGGTATTTTACTGTTACAAACTGGAGGGGCAGTTTCTAATTACTATTGGTCCAAGAACAAGTTCAGGCGTGTGGCTAACCTATACTTTCTTACCATCTCAATCTTATCCACCACACCCATCAGTCCTGTGCATCCAATTACAAATGTGGTCCCTTTAAGTCTGGTTCTACTCGTCTCTCTCATTAAAGAAGCATTTGAGGACTGGAAACGATTCCAGAATGATATGGCAATTAATAATAATCTTGTAGATGTGCTGCAAGATCAAAAGTGGGAGAGTGTTCCTTGGAAAAGGTTGCAAGTTGGAGACATTGTTAGGGTTCGGCAAGATGGATTTTTTCCTGCGGATCTTCTTTTCCTTGCTAGTACAAATCCAGATGGTGTCTGCTACATTGAGACTGCTAACCTGGACGGGGAGACAAATTTGAAGATTAGGAAGGCCCTGGAAAAGACCTGGGATTACCTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAGTACAATGCGAGCAACCAAACAATTCACTCTACACTTTCACAGGCAATGTTATTATTCAGAAGCAAACATTACCTCTCAGCCCAAACCAACTTTTATTGCGAGGATGCAGTCTCAGGAACACTGAGTATATTGTTGGGGCTGTTATTTTTACAGGCCATGAAACAAAGGTTATGATGAATGCTATGAATGTTCCCTCCAAAAGAAGTACTCTGGAAAAGAAACTTGACAAACTTATACTTACACTATTTGCTACTCTCTTTATGATGTGTTTGATTGGAGCCATCGGCAGTGGTGTGTTTGTAAACCAAAAGTACTACTACTTAGCTCTTGATAAGGGAGGTGAAAACCAATTCAACCCTCGCAACCGGTTCCTGGTTGTCATTCTGACCATGTTTACCCTGATTACTCTGTACTCGACAATCATTCCTATTTCCCTTTATGTTTCCATTGAGATGATCAAATTTATTCAATCGACACAATATATCAATAAAGATCTAAATATGTTCCATGCTGATAGCAATACCCCTGCATTGGCCAGAACTTCCAATTTGAACGAAGAACTTGGACAGGTAGAGTACATCTTTTCAGATAAAACTGGTACTCTTACCAGGAATCTAATGGAGTTCTTTAAGTGTTCAATTGGTGGAGAGGTTTATGGCACTGGTATCACAGAAATAGAGAGGGGAATTGCTGAGCAGAATGGCTTGAAAGTGGAAGAGGCACACAAATCAGCCAATGCTGTTCAAGAAAAGGGATTTAACTTCGATGATGCAAGGCTAATGAGAGGAGCATGGAGAAATGAGCCCAACGCTGATCTTTGTAAGGAATTTTTCAGATGCCTTGCTATTTGTCATACTGTACTTCCTGAGGGTGACGAATCCCCAGAAAAGATCACATATCAAGCAGCATCACCTGATGAGGCTGCCTTGGTAACTGCTGCTAAAAACTTTGGCTTCTTCTTTTACAGGCGTACACCTACAACAATATATGTTCGCGAATCTCATGTTGAGAAGATGGGAAAAATCCAAGATGTTTCTTATGAAATTCTGAATGTACTTGAGTTCAATAGTGTAAGGAAGCGTCAGTCTGTGGTCTGTCGTTATTCTGATGGCAGGCTTGTTCTGTACTGCAAGGGTGCTGATACCGTAGTATATGAGAGATTGGCTGGTGGAAATGATGATCTGAAGAATGTAACTAGGGAACACTTGGAGAAATTTGGATCTTCCGGTCTGAGAACCCTATGCCTTGCTTACAGAGATTTGCATCCTGACGTGTATGAAAGCTGGAATGAGAAATTCATTCAAGCTAAGTCTTCATTAAGAGATCGTGAAAAGAAATTGGATGAGGTTGCAGAACTTATAGAGAAAGAACTTATTTTGATTGGCTGTACTGCTATAGAAGATAAGCTTCAAGAAGGAGTACCAAACTGTATACAGACACTTTCTAGAGCTGGTATCAAGATTTGGGTGCTAACAGGAGACAAGATGGAAACTGCTATTAATATAGCTTATGCTTGCAATTTAATAAACAATGAAATGAAACAATTTATTATCAGTTCAGAAACGGATGCAATCAGAGAAGTTGAAAACAGGGGTGACCAAGTAGAACTTGCACGTTTTATTAGAGAAGAAGTAAAAAAGGAACTGAAGAGATGTCTTGAGGAAGCGCAGCAGTGTTTACATTCTGTCTCTCCACCAAAATTAGCACTCGTTATAGATGGAAAATGTTTGATGTATGCATTAGATCCAAGTCTGCGAGTTACTTTACTAAACTTGAGCTTGAATTGTAGTTCGGTTGTTTGCTGCCGGGTTTCTCCTTTGCAGAAAGCGCAGGTGACAAGTCTGGTGAAGAAAGGTGCACAGAAAATAACACTTAGTATTGGTGATGGTGCTAATGATGTTAGCATGATTCAAGCAGCTCATGTGGGCATTGGAATAAGTGGGCAGGAAGGAATGCAAGCAGTGATGGCTAGTGATTTTGCTATTGCTCAGTTTCGCTTTCTCACAGATTTGCTTCTTGTGCATGGGCGATGGTCATATCTTAGAATATGCAAGGTTGTCACGTACTTCTTTTACAAGAATCTTACATTCACTTTAACTCAGTTTTGGTTTACCTTCCAAACTGGATTTTCTGGTCAAAGATTCTACGATGATTGGTTCCAGTCGTTGTATAATGTCATATTCACCGCCCTACCTGTAATAATAGTTGGACTATTTGACAAGGATGTCAGTGCTTCCCTTTCCAAAAAGTACCCTGAGCTCTACAGAGAGGGAATAAAAAATGTGTTCTTCAAGTGGAGAGTTGTGACAACTTGGGCTTTCTTTTCCATCTACCAATCTTTAGTCTTTTATTATTTTGTAACCGCTTCTAGTTCCAGCAGTCAATCGTCATCTGGCAAGGTGTTTGGTCTGTGGGATATCAGCACGATGACTTTCACTTGCATTGTCGTGACTGTGAATTTGCGGCTGCTTATGATCTGCAATTCAATTACCCGGTGGCATTATATTACGGTTGGGGGAAGCATTTTAGCATGGTTCCTATTTATTTTCTTATATTCCGGTATTATGACACCCCATGATAGGCAGGAAAATGTATATTTCGTCATATATGTCTTAATGAGTACATTATACTTTTACGTAGCTGTTATCCTTGTCCCCGTTGTTGCACTTCTTTGTGATTTCGCTTACCAAGGCATTCAGAGATGGTTTTTCCCCTACGATTATCAGATAGTACAAGAAATACATAGACATGAACCTGAAGGTAGAGGTACGGCAGGATTGCTGGAGATTCAGAACCATCTTACACCGGAAGAGGCAAGAAGCTACGCCATGGCTCAACTCCCTCGAGAATTATCAAAGCACACTGGCTTTGCTTTTGACTCACCTGGCTACGAGTCATTTTTTGCTGCACAGCTTGGTATTTATGCCCCACAGAAAGCATGGGATGTTGCTAGGAGAGCCAGTGTGAAGTCAAGACCAAAGATTAAGGAAAAGAAGTATTTTCCCAACACAACATCCTTCAAGAGAAAGCTCAACAGAAGTCAAATCTCCTATGCTCTACTGAATGCAAGCTGTTTTAGATTCTCTTGGAGGCTAATTGATTCAGCAAGGTCATTTATAGCAGTTTTAGAAGATGGTTGCTATTTGCTTACCATTGTAGCCTCTGCAGAAAATGGCATCTTTGATGTGATGGTCGGGTCTTTGGTCTTGCTTGGAGCTGTGGTTGTGGGGCTGTTTGTATGGCTTTTAATCGTTGGGTCGCCACCGCCGGGAAGAACGACAAGCTGGCCGGAAGCCAAGTCTGAGGTTGAGGGAAGCCGTGTCATGAAGCAAGCTAAGGAATTGACCAACATCAACCATCCAAAGTTGGATCCTAACTTTATGAGCAAAGTTAGAGTTCCTAAAGGACCGGACCCCATTCATAACAGGAGAATTGGGGTTAAAGGAGGGACTCCCAGAGGAGCTTAG 4209 41.67 MSGWDRVRPSSSRFGRGNSAMHERTTSTTTVRLGRVQPQAPGHRTIFCNDRDANLLVKFKGNSVSTTKYNFFTFFPKGLFEQGILLLQTGGAVSNYYWSKNKFRRVANLYFLTISILSTTPISPVHPITNVVPLSLVLLVSLIKEAFEDWKRFQNDMAINNNLVDVLQDQKWESVPWKRLQVGDIVRVRQDGFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGEVQCEQPNNSLYTFTGNVIIQKQTLPLSPNQLLLRGCSLRNTEYIVGAVIFTGHETKVMMNAMNVPSKRSTLEKKLDKLILTLFATLFMMCLIGAIGSGVFVNQKYYYLALDKGGENQFNPRNRFLVVILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQYINKDLNMFHADSNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGITEIERGIAEQNGLKVEEAHKSANAVQEKGFNFDDARLMRGAWRNEPNADLCKEFFRCLAICHTVLPEGDESPEKITYQAASPDEAALVTAAKNFGFFFYRRTPTTIYVRESHVEKMGKIQDVSYEILNVLEFNSVRKRQSVVCRYSDGRLVLYCKGADTVVYERLAGGNDDLKNVTREHLEKFGSSGLRTLCLAYRDLHPDVYESWNEKFIQAKSSLRDREKKLDEVAELIEKELILIGCTAIEDKLQEGVPNCIQTLSRAGIKIWVLTGDKMETAINIAYACNLINNEMKQFIISSETDAIREVENRGDQVELARFIREEVKKELKRCLEEAQQCLHSVSPPKLALVIDGKCLMYALDPSLRVTLLNLSLNCSSVVCCRVSPLQKAQVTSLVKKGAQKITLSIGDGANDVSMIQAAHVGIGISGQEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPELYREGIKNVFFKWRVVTTWAFFSIYQSLVFYYFVTASSSSSQSSSGKVFGLWDISTMTFTCIVVTVNLRLLMICNSITRWHYITVGGSILAWFLFIFLYSGIMTPHDRQENVYFVIYVLMSTLYFYVAVILVPVVALLCDFAYQGIQRWFFPYDYQIVQEIHRHEPEGRGTAGLLEIQNHLTPEEARSYAMAQLPRELSKHTGFAFDSPGYESFFAAQLGIYAPQKAWDVARRASVKSRPKIKEKKYFPNTTSFKRKLNRSQISYALLNASCFRFSWRLIDSARSFIAVLEDGCYLLTIVASAENGIFDVMVGSLVLLGAVVVGLFVWLLIVGSPPPGRTTSWPEAKSEVEGSRVMKQAKELTNINHPKLDPNFMSKVRVPKGPDPIHNRRIGVKGGTPRGA 1402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 34213421 34235332 + CaPI482276_05g026810.1 Cam05g2681 128085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g2681 1402 SFLD p-type atpase 424 925 IPR044492 -
Cam05g2681 1402 Gene3D - 554 706 IPR023299 GO:0000166(InterPro)
Cam05g2681 1402 PRINTS P-type cation-transporting ATPase superfamily signature 874 893 - -
Cam05g2681 1402 PRINTS P-type cation-transporting ATPase superfamily signature 442 456 - -
Cam05g2681 1402 ProSitePatterns E1-E2 ATPases phosphorylation site. 444 450 IPR018303 -
Cam05g2681 1402 Gene3D - 707 914 IPR023214 -
Cam05g2681 1402 FunFam Phospholipid-transporting ATPase 551 706 - -
Cam05g2681 1402 Pfam Phospholipid-translocating P-type ATPase C-terminal 902 1152 IPR032630 -
Cam05g2681 1402 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 30 1165 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0048194(PANTHER)|GO:0140326(PANTHER)
Cam05g2681 1402 CDD P-type_ATPase_APLT_Dnf-like 61 1034 - -
Cam05g2681 1402 FunFam Phospholipid-transporting ATPase 140 309 - -
Cam05g2681 1402 MobiDBLite consensus disorder prediction 1380 1402 - -
Cam05g2681 1402 NCBIfam HAD-IC family P-type ATPase 847 953 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cam05g2681 1402 SFLD Haloacid Dehalogenase 424 925 - -
Cam05g2681 1402 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 507 712 IPR023299 GO:0000166(InterPro)
Cam05g2681 1402 SUPERFAMILY HAD-like 430 917 IPR036412 -
Cam05g2681 1402 FunFam Phospholipid-transporting ATPase 707 914 - -
Cam05g2681 1402 Pfam Phospholipid-translocating ATPase N-terminal 46 82 IPR032631 -
Cam05g2681 1402 Pfam Cation transport ATPase (P-type) 538 634 - -
Cam05g2681 1402 NCBIfam phospholipid-translocating P-type ATPase 59 1160 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cam05g2681 1402 Pfam E1-E2 ATPase 163 342 - -
Cam05g2681 1402 Gene3D - 144 309 - -
Cam05g2681 1402 SUPERFAMILY Calcium ATPase, transduction domain A 161 305 IPR008250 -
Cam05g2681 1402 MobiDBLite consensus disorder prediction 1 28 - -
Cam05g2681 1402 MobiDBLite consensus disorder prediction 12 28 - -
Cam05g2681 1402 SUPERFAMILY Calcium ATPase, transmembrane domain M 100 1152 IPR023298 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g2520 Cam-Chr5:33046188 Cam05g2681 Cam-Chr5:34213421 2.40E-274 dispersed
Cam05g2681 Cam-Chr5:34213421 Cam06g0935 Cam-Chr6:14042056 5.50E-271 dispersed
Cam05g2681 Cam-Chr5:34213421 Cam08g1360 Cam-Chr8:19898440 2.40E-06 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g2681 K14802 - csv:101207069 2359.33